CN189329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_MACFA (Cell division control protein 42 homolog OS=Macaca fascicularis GN=CDC42 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.039e-46 Identity = 87/159 (54.72%), Postives = 117/159 (73.58%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVF+N++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PI+ E+L + + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFNNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.479e-46 Identity = 87/162 (53.70%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 +R +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PELK P VP +L+GT++DLRDD + + + P++ G +L K IGA Y+ECS+ TQ Sbjct: 19 NRILKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQ 180
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACD_ENTHI (Rho-related protein racD (Fragment) OS=Entamoeba histolytica GN=RACD PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.479e-46 Identity = 87/162 (53.70%), Postives = 117/162 (72.22%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 ++ +K V VGDG+VGKTCLLI YT+N FP DYVPTVFDN+ A + V+G +NLGLWDTAGQED +LRPLSY D+F+L FS+IS+ S+ N+S KW+PE+KHY P +++VGT D R+D+ + PI+T +GE+L K I A Y+ECS+ T+ Sbjct: 6 AKSVKLVVVGDGSVGKTCLLICYTTNEFPKDYVPTVFDNYMAPMTVDGEPINLGLWDTAGQEDSEQLRPLSYPNTDLFLLCFSVISRTSFNNISSKWLPEIKHYEPKCKMMVVGTNTDCRNDEAMIRKLADENQKPITTEEGEKLAKDIKAICYMECSALTR 167
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACB_ENTHI (Rho-related protein racB (Fragment) OS=Entamoeba histolytica GN=RACB PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.479e-46 Identity = 88/153 (57.52%), Postives = 113/153 (73.86%), Query Frame = 3 Query: 210 GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 G G VGKTCLL+SYT+N FPT+YVPTVFDN+SA V+V+ +NLGLWDTAGQEDY+R+RPLSY DVF+L FS++S S+EN+S KW PE+ H+ P P +L+GTK+D+RD++ PI++ QGE K IGA YIECS+ TQ Sbjct: 1 GAGGVGKTCLLVSYTTNAFPTEYVPTVFDNYSATVMVDSRPINLGLWDTAGQEDYDRIRPLSYPQTDVFLLCFSVVSPPSFENISSKWKPEVSHHCPNAPCLLIGTKIDIRDEQTQTNKTCDKKIEPITSEQGEAKCKDIGALKYIECSALTQ 153
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACF2_DICDI (Rho-related protein racF2 OS=Dictyostelium discoideum GN=racF2 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.543e-46 Identity = 90/159 (56.60%), Postives = 119/159 (74.84%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTC+LISYT+N FP++Y+PTVFDN+ AN++++G +LGLWDTAGQE+Y+RLRPLSY DVF++ FS+IS++S+ENVS KW E+ H+APGVPI+LVGTK D+R+D + + +G E K I A Y+E S+ TQ Sbjct: 4 IKCVVVGDGAVGKTCMLISYTTNGFPSEYLPTVFDNYCANLMLDGKPYSLGLWDTAGQEEYDRLRPLSYPQTDVFLICFSIISQSSFENVSTKWFKEVNHHAPGVPIVLVGTKQDIRNDNDSIKKLKERNIELVPYEKGLEKAKEINA-IYLEASALTQ 161
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45 Identity = 86/161 (53.42%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 + +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PELK P VP +L+GT++DLRDD + + + P++ G +L K IGA Y+ECS+ TQ Sbjct: 20 KMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQ 180
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RAC2_CAEEL (Ras-related protein rac-2 OS=Caenorhabditis elegans GN=rac-2 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45 Identity = 87/159 (54.72%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLL+SYT+N FP +Y+ TVFD +S NV+V+G +NL LWDTAGQ+DY++ R LS+ DVF++ F+L + AS+ENV KW PE+ H+ P PIILVGTK DLR+D+ + P+S QG + K I A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACH_DICDI (Rho-related protein racH OS=Dictyostelium discoideum GN=racH PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44 Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV-PIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IK + VGD +VGKTCLLISYT+N+FP +YVPTVFDN++AN +VN + +NLGLWDTAG E+YN RPLSY G DVFI+ FSLIS+ S+ENV KKW PE+ V PIILVGTKLDLR + ++ GE++R IGA Y ECS+ TQ Sbjct: 5 IKVMVVGDMSVGKTCLLISYTTNSFPGEYVPTVFDNYNANAIVNNTPINLGLWDTAGSEEYNSFRPLSYPGTDVFIICFSLISQTSFENVIKKWHPEIIQNMEQVPPIILVGTKLDLRGKGK-----SEEKEVTPEMGEQMRAAIGAYKYSECSALTQ 157
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACE_DICDI (Rho-related protein racE OS=Dictyostelium discoideum GN=racE PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.140e-43 Identity = 87/166 (52.41%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQPECE 674 S + +K V VGDGAVGKTCLLI Y N FP DYVPTVF+N++A + + LWDTAGQE+Y+RLRPLSY GADV +L FS IS++SYE + KW PE+ HY P VP ILVGTK+DLR+ + + PI+ G ++K I A Y+E S+KT+ E Sbjct: 7 SGATRVKLVVVGDGAVGKTCLLICYAQNDFPVDYVPTVFENYTATRKRGNEDIKVHLWDTAGQEEYDRLRPLSYPGADVVLLCFSTISQSSYEAIRDKWAPEVNHYIPDVPSILVGTKIDLREQQHPDPNSGKFEPITADMGISMQKQIKAKKYLEVSAKTRQGLE 172
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42 Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKT 659 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ FS+ S S +NV +KWI E+ H+ GVPIILVG K DLRDD + P+ST++G+++ + IGA Y+ECS+KT Sbjct: 11 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKT 167 The following BLAST results are available for this feature:
BLAST of CN189329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189329 ID=CN189329; Name=CN189329; organism=Citrus sinensis; type=EST; length=687bpback to top |