CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2725 contig Csv1_Contig2725:1..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKE----AIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D  M  KI++FG+A+        A+T  +VGT GY+APEY   G  S K DV+SFGV++LE+I+GK      + E   +     +  +EG          E +D +LL+     ES M  + IA++C+ ++P+KRP+M  +V
Sbjct:  467 DEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTDLPTFAWQNWIEGTS-------MELIDPVLLQTHDKKES-MQCLEIALSCVQENPTKRPTMDSVV 600          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = -1
Query:  316 DSNMRAKIANFGLAKSGC----NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWM-DEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 723
            DS+  AK+++FGLA+ G     + ++  ++GT GY APEY++ G ++ + DV+SFGVVLLEL+ G++A+D       AK + +++        R K  +  +  L      E  +    IA+ CL  +P  RP+M  +V A
Sbjct:  206 DSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRP---AKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRA 343          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID-EEGKVLWAKVEGILEGNEERKVKRVKEWMDEIL---LKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D +M AK+A+FG +K     G + +++ + GT GY+ PEY     +S K DVFSFGVVLLE++SG+E ++ +  +V W+ VE         KV       DEI+   +K     E++   + +A+ CL    + RP MVDIV
Sbjct:  730 DHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKV-------DEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV 864          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID-EEGKVLWAKVEGILEGNEERKVKRVKEWMDEIL---LKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D +M AK+A+FG +K     G + +++ + GT GY+ PEY     +S K DVFSFGVVLLE++SG+E ++ +  ++ W+ VE         KV       DEI+   +K     E++   + +A+ CL    + RP MVDIV
Sbjct:  731 DQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKV-------DEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV 865          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = -1
Query:  316 DSNMRAKIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 723
            D     K+++FGLAK G      H+    +GT GY APEY   G ++ K DV+SFGVV LELI+G++AID      E+  V WA+       N+ RK  +    + +  LK      ++  A+ +A  C+ +  + RP + D+V A
Sbjct:  222 DEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARP----LFNDRRKFIK----LADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTA 359          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 53/141 (37.59%), Postives = 84/141 (59.57%), Query Frame = -1
Query:  316 DSNMRAKIANFGLAK--SGCNA-ITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVK--EWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 723
            D +   K+A+FGLA+  S C + ++  I GT GYI PEY      +TK DV+SFGV+LLEL++GKE    + K       G L G   +K+ + K  + +D +L+  ++   S +  + IA+ CL + P+KRP+M+D++ A
Sbjct: 1052 DGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFK---ESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALK-NSQLRLLQIAMLCLAETPAKRPNMLDVLKA 1188          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSI---SMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D+ M  K+A+FG A+        A T  I GT+GY+APEYL  G +S K DV+SFGV+LLE+ISG+     EG           EG      KR  E   EI++   +       ++  + I + C+ ++P+KRP+M  ++
Sbjct:  487 DAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEG-----------EGLAAFAWKRWVEGKPEIIIDPFLIEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVI 616          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14
Identity = 54/143 (37.76%), Postives = 76/143 (53.15%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGK-----EAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D+ M  K+A+FG+A+        A T  +VGT GYI+PEYL  G  S K DV+SFGV++LE+ISGK        DE GK L      +       +     E +D  L K+  S E V   + IA+ C+  DP +RP++  I+
Sbjct:  455 DAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNL------VTYAWRHWRNGSPLELVDSELEKNYQSNE-VFRCIHIALLCVQNDPEQRPNLSTII 590          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 46/144 (31.94%), Postives = 83/144 (57.64%), Query Frame = -1
Query:  319 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVY 723
            D    AK+++FGLAK   S  + +T  ++GT GY+APEY   G+++ K D++SFG++++E+I+G+  +D      E   V W K    + GN     +R +E +D   + +  S +++   + +A+ C+  D +KRP M  I++
Sbjct:  289 DRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLK---SMVGN-----RRSEEVVDP-KIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIH 423          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = -1
Query:  316 KIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 705
            K+++FGLAK G +    H+    +GT GY AP+Y   G ++ K D++SFGVVLLELI+G++AID      ++  V WA+           K +R    M + LL+    +  +  A+ I+  C+ + P+ RP + D+V A
Sbjct:  245 KLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWAR--------PLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLA 376          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CRK27_ARATH3.492e-1535.92Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y3545_ARATH4.561e-1534.04Probable receptor-like protein kinase At3g55450 OS... [more]
NORK_PEA4.561e-1537.32Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR4.561e-1536.62Nodulation receptor kinase OS=Medicago truncatula ... [more]
PBS1_ARATH7.780e-1534.93Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
EXS_ARATH7.780e-1537.59Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK39_ARATH1.327e-1435.46Putative cysteine-rich receptor-like protein kinas... [more]
CRK33_ARATH1.733e-1437.76Putative cysteine-rich receptor-like protein kinas... [more]
Y1154_ARATH5.043e-1431.94Probable serine/threonine-protein kinase At1g01540... [more]
RLCK7_ARATH5.043e-1435.00Probable serine/threonine-protein kinase RLCKVII O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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