CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEW---------MDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D     K+++FGLA+ G +    H+    VGT GY APEY+  G +  K DV+SFGVVL E+I+G+  I+    V            E R +  VKE+         + +  L+++       S   +A  CL K+  +RP+M  +V
Sbjct:  227 DDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVA-----------ERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVV 362          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 46/144 (31.94%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDE------EGKVL-WAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D +  A + +FGLAK      + +T  + GT G+IAPEYL+ G  S K DVF FGV++LELI+G + ID+      +G +L W +     +   E   + +K   D+++L++ +          +A+ C    P+ RP M  ++
Sbjct:  435 DESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVE---------LALLCTQPHPNLRPRMSQVL 569          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 43/150 (28.67%), Postives = 75/150 (50.00%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSI------------SMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            + +  AK+A+FGL++S    G   ++  + GT GY+ PEY     ++ K DV+SFG++LLE+I+ +  ID                 + R+   + EW+  +L K  I               SV  A+ +A++CL+   ++RP+M  +V
Sbjct:  712 NEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVID-----------------QSREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVV 844          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGK----EAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DS +  K+++FGLAK        I+  + GT GY+APEY   G ++ K DV++FGVV LEL+SG+    E +++E + L      + E  + R+V+ +   + E       +ME     +GIA+ C     + RP M  +V
Sbjct:  826 DSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHE--KGREVELIDHQLTE------FNMEEGKRMIGIALLCTQTSHALRPPMSRVV 958          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = -1
Query:  316 DSNMRAKIANFGLAKSGCNAITMHIV----GTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEE------GKVLWAK-------VEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 723
            D NMRAK+++FGL++     +T H+     GT GY+ PEY A   ++ K DV+SFGVVL EL+SGK+ +  E        V WA+       V GI++                  +  ++ +ESV     +A  C+ +    RP M +++ A
Sbjct:  740 DINMRAKVSDFGLSRQTEEDLT-HVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDP----------------CIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVA 875          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = -1
Query:  334 DSNMRAKIANFGLAKSGC---NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAI----DEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSM 723
            D    AK+++FG ++S       +T  + GT GY+ PEY      + K DV+SFGVVL+ELI+G++ +     EEG+ L       LE  +E +V  +     +I +K+   ++ +M+   +A  CL +   KRP+M
Sbjct:  566 DEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGL---ATHFLEAMKENRVIDI----IDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNM 695          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 42/130 (32.31%), Postives = 74/130 (56.92%), Query Frame = -1
Query:  325 IANFGLAK---SGCNAITMH-IVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 702
            I +FGLAK    G  A + + I G+ GYIAPEY     ++ K DV+S+GVV+LE+++GK+ ID          +G+   +  +K++ ++     +  +    +E +M  +G+A+ C++  P  RP+M D+
Sbjct:  936 IGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDP------TIPDGLHIVDWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDV 1059          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = -1
Query:  334 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDE-EGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSM 723
            D+ M  K+A+FG+A+        A+T  +VGT GY+APEY+ +   S K DV+SFGVVLLE+I+G+   +  E   L A         E   +      +D +L +       +M  + I + C+ ++ SKRP+M
Sbjct:  473 DAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPAYAWKCWVAGEAASI------IDHVLSRS--RSNEIMRFIHIGLLCVQENVSKRPTM 599          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 43/149 (28.86%), Postives = 72/149 (48.32%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSI------------SMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D + +AK+A+FGL++S    G   ++  + GT GY+ PEY     ++ K DV+SFG+VLLE+I+ +  I                  + R+   +  W+  +L K  I               SV  A+ IA++C++    KRP+M  +
Sbjct:  707 DEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVI-----------------QQTREKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQV 838          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  322 AKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGK----EAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSA-------MGIAIACLHKDPSKRPSMVDIV 708
            A++++FGLA+    + T     T GY APE      VS K DV+SFGVVLLEL++GK      ++EEG  L   V  +            +EW +E+   + +S+E+V+S        + + I C  + P KRP MV++V
Sbjct:  504 ARVSDFGLAQLVSASSTTPNRAT-GYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAR----------EEWRNEVFDSELMSIETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVV 632          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
Y5707_ARATH3.059e-1131.97Probable receptor-like protein kinase At5g47070 OS... [more]
Y5457_ARATH3.059e-1131.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH3.059e-1128.67Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH5.219e-1133.33Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH5.219e-1132.03Probable LRR receptor-like serine/threonine-protei... [more]
WAKLE_ARATH5.219e-1132.85Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
RCH1_ARATH5.219e-1132.31LRR receptor-like serine/threonine-protein kinase ... [more]
CRK38_ARATH5.219e-1134.07Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
Y2289_ARATH6.816e-1128.86Probable LRR receptor-like serine/threonine-protei... [more]
RLK90_ARATH6.816e-1135.00Probable inactive receptor kinase RLK902 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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