CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 51/147 (34.69%), Postives = 80/147 (54.42%), Query Frame = -1
Query:  319 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID-----EEGK----VLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVY 723
            D +  AK+A+FGL+K      + I+++I GT GY+ PEYL    ++ K DV++FGVVLLE++  + AID     EE      V++ K +G ++           E +D  L+   I   S+   M IA  CL +   +RPSM D+++
Sbjct:  622 DEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTID-----------EILDPSLI-GQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIW 756          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAKSGC---NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEIL---LKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D   RAK+A+FG ++S        T  I GT GY+ PEY      + K DV+SFGV+L ELI+G + +     ++    + I+   E  +V   ++ + +I+   +++    E VM+   +A+ CL     KRP+M ++
Sbjct:  588 DEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPV-----IMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREV 721          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS---GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D    A + +FGLAK      + +T  + GT G+IAPEYL+ G  S K DVF +GV+LLELI+G++A D      ++  +L   V+ +L      K K+++  +D  L    +  E V   + +A+ C      +RP M ++V
Sbjct:  411 DEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVL------KEKKLESLVDAELEGKYVETE-VEQLIQMALLCTQSSAMERPKMSEVV 546          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS---GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D    A + +FGLAK      + +T  + GT G+IAPEYL+ G  S K DVF +GV+LLELI+G++A D      ++  +L   V+ +L      K K+++  +D  L    +  E V   + +A+ C      +RP M ++V
Sbjct:  430 DEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVL------KEKKLESLVDAELEGKYVETE-VEQLIQMALLCTQSSAMERPKMSEVV 565          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKE---AIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D++M  KIA+FG+A++         T  +VGT GY+ PEY+A G  STK DV+SFGV++LE++SG++       +G V           N +  ++ V     +  +  S   + V   + I + C+ ++P  RP++  I
Sbjct:  483 DADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSLELV-----DPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTI 617          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAK---SG---CNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRV---KEWMDEILLK------DSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D  M  KIA+FGLAK   SG    +  T  I GT GY+APEY   G  S K DVFSFGV+++E+I+GK               G   G+E+ +       + W ++ +L        + S   ++  + I + C+ +  + RP+M  +
Sbjct:  491 DQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKR-----------NNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMATV 627          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
Y2232_ARATH8.902e-1134.69Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLN_ARATH8.902e-1130.94Wall-associated receptor kinase-like 18 OS=Arabido... [more]
SERK5_ARATH8.902e-1133.57Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH8.902e-1133.57Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK30_ARATH8.902e-1131.43Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH8.902e-1131.76Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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