CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2725 contig Csv1_Contig2725:1..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 49/141 (34.75%), Postives = 83/141 (58.87%), Query Frame = -1
Query:  334 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLK-------DSISMESVMSAMGIAIACLHKDPSKRPSM 723
            D +M  KIA+FG+A++       A T  +VGT GY+ PEY+A+G  S K DV+SFGV++LE+I GK++        + +++G + GN    V R+  W +E  L+       +S   + V+  + I++ C+ ++P+ RP+M
Sbjct:  469 DVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSS------FHEIDGSV-GNLVTYVWRL--WNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTM 600          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = -1
Query:  334 DSNMRAKIANFGLAKSG----CNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDE--EGKVLWAKVEGILEGNEERKVKRVKEWMDEILL-KDSISMESVMSAMGIAIACLHKDPSKRPSM 723
            D    AKI++FGLA++        +T  IVGT  Y+APE L  G ++ K D++SFGVVLLE+I+G  A+DE  E ++L    E I     E + K +++++D+ +   DS S+E++ S   +A  CLH+  +KRP +
Sbjct:  320 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI-----EDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDI 447          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS---GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D    A + +FGLAK        +T  + GT G+IAPEYL+ G  S K DVF +GV+LLELI+G+ A D      ++  +L   V+G+L   +E+K+    E + ++ L+ +   E V   + +A+ C    P +RP M ++V
Sbjct:  425 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL---KEKKL----EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 560          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID--EEGKVL--WAKVEGILEGNEERKVKRVKEWMDEILLK--DSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D N  A + +FGLAK      +     + G+ GYIAPEY     V+ K D++SFGVVLLEL++GK  +   E+G  L  W +       N  R      E +D  L K  D + +  +++   IA+ C    PS RP+M ++V
Sbjct:  961 DENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTR-------NHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVV 1096          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAKSGC---NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAI----DEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D   RAK+++FG ++S       +T  + GT GY+ PEY      + K DV+SFGVVL+ELI+G++ +     EEG+ L       LE  +E +V  +     +I +KD   +E VM+   +A  CL++    RP+M ++
Sbjct:  563 DEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGL---ATHFLEAMKENRVIDI----IDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEV 695          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAI--DEEGKVL------WAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D    AK+A+FGLAK    G   ++  + GT GY+APEY   G ++ K DV+SFGVVLLEL+S ++AI  DEEG+ +      W+ V       E + +  V++ M E         E +   + IA+ C H     RP+M  +V
Sbjct:  421 DERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLV------REGQTLDVVEDGMPE-----KGPPEVLEKYVLIAVLCSHPQLHARPTMDQVV 554          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK--SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDE---EGKVLWAKVEGILEGNEERKVKR----VKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DS+M   I +FGLA+        T  + GT GYIAPE     V S + DV+S+GVVLLEL++GK A+D    E   + + V  +L   E+           + +DE+L  D+   E  +    +A+ C  K P  RPSM D+V
Sbjct:  930 DSDMEPHIGDFGLARILDDSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELL--DTKLREQAIQVTDLALRCTDKRPENRPSMRDVV 1070          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK-----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKE-----AIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D  M  KIA+FG+A+           T  IVGT GY+APEY+  G  S K DV+SFGV++LE+ISGK+     + D  G ++        EG     V ++      ++   S S   +M  + I + C+ +  ++RPSM  +V
Sbjct:  478 DEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKI------LMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVV 615          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 49/145 (33.79%), Postives = 77/145 (53.10%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHI-----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEE------GKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D +  A++++FG+A+   +A+  H+      GT GY+ PEY      + K DV+S+GV+LLEL+SGK+ ID E        V WAK        +  + KR  E +D  L+ D      ++  + IA  CL   P KRP+M+ ++
Sbjct:  994 DQDFVARVSDFGMARL-VSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAK--------QLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVM 1129          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAKSGCNAITM---HIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D N  A++++FG+AKS     T    +++GT GYI PEY     ++ K D++SFG+VLLEL++GK+A+D E  +     + IL   ++  V    +    +   DS     +     +A+ C  ++P +RP+M ++
Sbjct:  785 DGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANL----HQMILSKADDNTVMEAVDAEVSVTCMDS---GHIKKTFQLALLCTKRNPLERPTMQEV 913          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CRK16_ARATH3.269e-1334.75Putative cysteine-rich receptor-like protein kinas... [more]
IRAK4_HUMAN4.269e-1338.69Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
BAK1_ARATH4.269e-1334.97BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y2317_ARATH5.576e-1334.97Probable leucine-rich repeat receptor-like protein... [more]
WAKLA_ARATH5.576e-1334.29Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
RKF3_ARATH5.576e-1336.55Probable LRR receptor-like serine/threonine-protei... [more]
PEPR2_ARATH5.576e-1336.36Leucine-rich repeat receptor-like protein kinase P... [more]
CRK26_ARATH5.576e-1334.03Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
BRL3_ARATH7.282e-1333.79Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
ERL2_ARATH9.511e-1331.62LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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