CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2725 contig Csv1_Contig2725:1..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 44/141 (31.21%), Postives = 74/141 (52.48%), Query Frame = -1
Query:  334 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMD-------EILLKDSISMESVMSAMGIAIACLHKDPSKRPSM 723
            D+++  KIA+FG+A+          T  IVGT GY+APEY   G  S K DV+SFGV++LE+ISG++              G  +G ++      + W +       + L+ ++     V+  + I + C+ +DP+KRP++
Sbjct:  485 DADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRK----------NSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRPAI 615          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSI------------SMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            + ++ AK+A+FGL++S    G   ++  + GT GY+ PEY     ++ K DV+SFG+VLLE+I+ +  I                 N+ R+   + EW+  +L K  I               SV  A+ +A++CL+   ++RP+M  +V
Sbjct:  726 NEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVI-----------------NQSREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVV 858          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMD-------EILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D++M  K+A+FG+A+        A T  +VGT GY++PEY   G  S K DV+SFGV++LE+ISG+     +   L+        GN      R+  W D       +   +DS     ++  + IA+ C+ +D   RP+M  IV
Sbjct:  474 DADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGR-----KNSSLYQMDASF--GNLVTYTWRL--WSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIV 609          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D    A + +FGLAK      + +T  + GT G+IAPEYL+ G  S K DVF FG++LLELI+G  A+ E GK +  K   +    +  K  +V+E +D  L      +E V   + +A+ C    P+ RP M ++V
Sbjct:  431 DEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL-EFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIE-VGEMLQVALLCTQFLPAHRPKMSEVV 565          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAK---SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAI-DEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D N+ AK+A+FG +K        +T  + GT GY+ PEY    +++ K DV+SFGVVL+ELISG++A+  E  +     V   +   +E    R+ E +D+ +L +  +   +  A  +A+ C      +RP M+++
Sbjct:  242 DENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKE---NRLHEIIDDQVLNEE-NQREIHEAARVAVECTRLKGEERPRMIEV 374          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  325 IANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEIL-LKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 702
            IA+FGLAK          +  + G+ GYIAPEY     ++ K DV+S+GVV+LE+++GK+ ID          EGI   +  R+ +   E +D  L  +     + +M  +G A+ C++  P +RP+M D+
Sbjct:  935 IADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDP------TVPEGIHLVDWVRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDV 1059          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 43/151 (28.48%), Postives = 73/151 (48.34%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKS-----GCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISM------------ESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D   +AKIA+FGL++S       + ++  + GT GY+ PEY     +S K DV+SFG++LLE+I+ +  ID                 + R+   + EW+  ++ K   S              SV  A+ +A++C +    KRP+M  ++
Sbjct:  700 DEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVID-----------------QTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVI 833          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK-----SGCNAITMHIV-GTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID----EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D   R +IA+FGLAK     S     +  +V GT GYIAPEY     V+ K DV+SFGVVL+EL++GK+ ++    E   ++        E N E  +K +   +++   +D++ +      + IA+ C  K P  RP M  +V
Sbjct:  823 DEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKV------LTIALLCTDKSPQARPFMKSVV 960          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  325 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKV--KRVKEWMD-------EILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDI 723
            D++M  KIA+FG+A+          T  IVGT GY++PEY   G  S K DV+SFGV++LE+ISG+            K    +E ++ + +     + W +       +  + DS     V+    I + C+ +DP KRP+M  I
Sbjct:  470 DADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGR------------KNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTI 603          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKE-----AIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D++M  KIA+FG+A+        A T  I GT GY++PEY   G  S K DV+SFGV++LE+ISGK+      ID+ G  L      +       +       + +  + +S         + IA+ C+ +DP+ RP +  I+
Sbjct:  479 DADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLE-------LVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAII 614          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CRK6_ARATH1.373e-1131.21Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
RLK6_ARATH1.794e-1129.33Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK5_ARATH1.794e-1133.10Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y2239_ARATH2.343e-1136.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH2.343e-1132.12Putative wall-associated receptor kinase-like 16 O... [more]
RCH2_ARATH2.343e-1133.59Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
MEE39_ARATH2.343e-1128.48Probable LRR receptor-like serine/threonine-protei... [more]
IKU2_ARATH2.343e-1134.03Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CRK7_ARATH2.343e-1132.19Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK35_ARATH2.343e-1132.17Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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