CN189313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20 Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIG 378 AG+EKK+ ++ EK +VA HE+GHAV+ + + G RV K+SI+PR ALG+T E++YL+ EL + LLGGRAAE+V + ISTGA +D+ RATD+ ++ YG++ G Sbjct: 414 AGLEKKSRRISPKEKKIVAYHESGHAVI----SEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDV-FLEEISTGASNDLERATDIIKGMVSYYGMSSVSG 533
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20 Identity = 65/191 (34.03%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 AG KK+ + E+ +VA HE GH V+G +L V K++I+PR G A G+ EDRY EL ++V LLGGR AEE+ + G +STGA +D +RAT++A + + E+G++ +GP+ GG V GRD Q+ + +E++ +++ E A ++ N D LE Sbjct: 403 AGPAKKSRVISKKERNIVAYHEGGHTVIGL----VLDEADMVHKVTIVPR-GQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIF-GEVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFG-------QSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLE 580
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20 Identity = 63/187 (33.69%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQG-QLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G+E+K + EK +A HEAGHA++G + +V K+SI+PR G ALG T ED+++ +L +++ LLGGRAAEEV + I+TGA +D++RATD+AY+ ++ +G++ +GP++I +++ + GG+ D L+ + EVK ++ E A +V + L+ + Sbjct: 399 GLERKGMTISPKEKEKIAIHEAGHALMGL----VSDDDDKVHKISIIPR-GMALGVTQQLPIEDKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFL----GGMTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAV 576
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.128e-20 Identity = 70/187 (37.43%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGLG 564 G+EKKT L+ SEK VA HEAGHAVVG + P + K+SI+PR G LG+ Y P +++L ++L R+ +LGGR AE++ + G+I+TGA DD+R+ T AY I ++G++ +G VS G E+ P+ QL+D EV+ L++SA L ++ + +E +G Sbjct: 547 GLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADP----LLKVSIIPR-GKGLGYAQYLP--REQFLYTREQLFDRMCMMLGGRVAEQL-FFGQITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQG---ETMVEKPYSEATAQLID---EEVRCLVRSAYNRTLELLTQCREQVEKVG 719
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.564e-19 Identity = 67/188 (35.64%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG---GIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 AG KK+ + E VA HEAGHAVVG V G +V+K++I+PR G A G+ E++Y EL + + +GGRAAE + Y ISTGA DDI RAT +A K + E+G++ +GP+ + G D S G +G +DL E++ ++ ++ E+A+ + N ++LE Sbjct: 454 AGPAKKSRVISQEELKAVAYHEAGHAVVGLKVK----GGNKVQKITIIPR-GNAGGYNLMTPEEEKYNASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDYSKG--TFGSKMAHEIDL---EIRKIISASEEIAIKAIEQNLELLE 630
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19 Identity = 64/168 (38.10%), Postives = 94/168 (55.95%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSA 507 G+EKKT L+ EK VA HEAGHAV G + P + K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA DD+R+ T AY I ++G+N +G +S G + P+ +L+D EV+ L+ A Sbjct: 555 GLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----LLKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLE---KPYSEATARLID---DEVRILINDA 708
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.017e-18 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 387 G+EKKT L+ EK VA HEAGHAV G + P + K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA DD+R+ T AY I ++G+N +G +S Sbjct: 554 GLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----LLKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQIS 673
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.017e-18 Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSA 507 G+EKKT L+ EK VA HEAGHAV G + P + K+SI+PR G LG+ Y P ++YL ++L R+ LGGR +EE+ + GRI+TGA DD+R+ T AY I ++G+N +G +S G + P+ +L+D EV+ L+ A Sbjct: 556 GLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----LLKVSIIPR-GKGLGYAQYLP--REQYLYTREQLLDRMCMTLGGRVSEEIFF-GRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLE---KPYSEATARLID---DEVRILINDA 709
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18 Identity = 56/171 (32.75%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 46 KAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 K ++A HE GHA+ G S+L VEK+++ PR GGA G T+ ED+ LL L R++T LGGRAAE+V + ++TGA D+++ T++A + + +G++ IGP+++ S+G + G + D + EV+ ++ E A+ +V N V++ Sbjct: 441 KRLIAYHEVGHAITG----SVLKSHDEVEKITLTPR-GGAKGLTWFTPEEDQSLLSRSALLARIITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMS-NIGPLALEDESTGQVFLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVID 605
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18 Identity = 66/188 (35.11%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG--GIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG KK+ L E+ VVA HE+GHA+VG +L V K+SI PRT ALGF D++L ++L R+ LGGRA+E ++++ +++GA DD+R+ T +AY + ++G+ IGP+S G GI G P+ + Q++D E + L+ A V++ N D L+ L Sbjct: 554 AGTAKKSKILSKEEQKVVAFHESGHALVGW----MLEHTEAVMKVSITPRTNAALGFAQM-LPRDQHLFTKEQLFERMCMALGGRASEALSFN-EVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGI----GRRPFSQGLQQMMD---HEARLLVAKAYRHTEKVLQDNLDKLQAL 728 The following BLAST results are available for this feature:
BLAST of CN189313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189313 ID=CN189313; Name=CN189313; organism=Citrus sinensis; type=EST; length=784bpback to top |