CN189313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRY---LLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQ-LVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG EKK A + ++ +VA HEAGHA+VG +L+P V K+SI+PR G A G T+ +E+R L L ++ LGGR AEEV + ++TGA +D + + +A + + +G ++ IG V+I GG G + +D D+V EV+ L++ A A ++ + D+L L Sbjct: 474 AGPEKKNAVVSEEKRRLVAYHEAGHALVG----ALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIG--GPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKL 657
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGV----PWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 AG+EKKT L EK VA HEAGHAV G + P + K+SI+PR GALG+ Y P D+YL+ ++ R++ LGGR +EE+ + +++GA DD ++ T MA + G++ IG +S D++ G P+ + +DL EVK+++ A ++ N D ++ Sbjct: 538 AGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADP----LLKVSIIPRGQGALGYAQYLP--PDQYLISEEQFRHRMIMALGGRVSEELHFPS-VTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLS--------FDQNDGNFKVNKPFSNKTARTIDL---EVKSIVDDAHRACTELLTKNLDKVD 708
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRY---LLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQ-LVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG EKK A + +K +VA HEAGHA+VG +L+P V K+SI+PR G A G T+ +E+R L L ++ LG R AEEV + ++TGA +D + + +A + + G ++ IG V+I GG G + +D D+V EV+ L++ A E A ++ + D+L L Sbjct: 495 AGPEKKNAVVSDEKKKLVAYHEAGHALVG----ALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIG--GGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKL 678
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 59/193 (30.57%), Postives = 96/193 (49.74%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G E+++ + +K A HEAGH ++G L+P K++I+PR G ALG T+ D + +L ++ TL GGR AEE+ Y S +STGA +DI+ AT++A + ++G + +GP+ A E G V GR + ++ EVK L++ A ++ N D+L + Sbjct: 395 GSERRSMVMSDFQKESTAYHEAGHVIIGR----LVPDHDPAHKVTIIPR-GQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYA--------EEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAM 574
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 57/193 (29.53%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G E+++ + +K A HEAGH ++G L+P K++I+PR G ALG T+ D + +L ++ TL GGR AEE+ Y + +STGA +DI+ AT +A + ++G + +GP+ A E G + GR + ++ EVK L++ A ++ N D+L + Sbjct: 395 GSERRSMVMSDFQKESTAYHEAGHVIIGR----LVPDHDPAHKVTIIPR-GRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYA--------EEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAM 574
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15 Identity = 60/186 (32.26%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G E+K+A + K + A HE GHA+V + + R K +I+PR G +LG T + + D+ +E L +GGRAAEE+ Y +I++GA +DI +AT +A + + E+G++ IGPVS+ E P R LV+ E+K+LL+++ E +L +++++ L+ L Sbjct: 511 GAERKSAFITPENKLMTAYHEGGHALVALFTKNAM----RPYKATIMPR-GSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSLEA-------EMDNLSPATR------ALVESEIKSLLEASYERSLSLLKSHKKELDAL 678
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G E+++ + +K A HEAGH +VG L+P K++I+PR G ALG T+ +D + ++L ++ TL GGR AEE+ Y +STGA +DI+ AT++A + ++G ++ +GP+ + E G + GR + ++ EVK L++ A ++ N D+L + Sbjct: 395 GSERRSMVMTEKQKESTAYHEAGHVIVGR----LVPEHDPAHKVTIIPR-GRALGVTFFLPKDDVLSINKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLLYS--------EEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAM 574
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG 408 G+EKK + E+ VA HE+GHAV G + P + K++I+PR ALGF NE+ L+ ++L LGGRAAEEV GRISTGA +D+ + T M Y +A YG + +G +S G Sbjct: 581 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEEVLI-GRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDG 708
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15 Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVD 468 G+E+K+ L EK VVA HEAGHAV G + P + K+SI+PR GALG+ Y P D +LL +L R+ LGGR +EE+ + +++GA DD ++ T MA + E G++ IG V+ D+S P+ + G ++D Sbjct: 594 GVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADP----LLKVSIIPRGQGALGYAQYLPG--DIFLLTEQQLKDRMTMSLGGRVSEELHFPS-VTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKR-----DDSDLTKPFSDETGDIID 736
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15 Identity = 60/181 (33.15%), Postives = 90/181 (49.72%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPD 546 G+EKK + E+ VA HE+GHAV G + P + K++I+PR ALGF Y P D L+ ++L LGGRAAEEV G+ISTGA +D+ + T M Y +A YG + +G +S G P+ Q ++ EV+ + A E + +++ + D Sbjct: 566 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVP--NDNLLMTKEQLFDMTCMTLGGRAAEEVLI-GKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDG----FEMSKPY---SSQTASIIDTEVREWVAKAYEKTVELIKQHKD 732 The following BLAST results are available for this feature:
BLAST of CN189313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189313 ID=CN189313; Name=CN189313; organism=Citrus sinensis; type=EST; length=784bpback to top |