CN189313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.061e-15 Identity = 57/192 (29.69%), Postives = 109/192 (56.77%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 AG+E T + G K ++A HE GHA+ T LLP P V+K++++PR A G T+ + +R LL +L ++ LGGRAAEE + + ++TGA +D+++ T++A + + +G++ ++GP+ + T G +E + GRD +++ + +V+ ++++ E L +++AN V++ Sbjct: 396 AGMEG-TPIMDGKIKRLIAYHETGHALTAT----LLPNHPPVQKVTLIPRRQ-AKGLTWFMQDNERDLLSKSQLMSMIMVALGGRAAEEAVFGNAEVTTGASNDLQQVTNLARQMVTRFGMS-SLGPLCLET----GNEE----IFLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMD 572
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.061e-15 Identity = 61/169 (36.09%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALE 513 G+EKK + E+ VA HE+GHAVVG + P + K++I+PR ALGF NE+ L+ ++L LGGRAAE+V G+ISTGA +D+ + T M Y +A YG + +G +S G D S P+ G ++D EV+ + A E Sbjct: 567 GLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEP----LLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLI-GKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPP-RDDGYDFS---KPYSNKTGAIID---EEVRDWVAKAYE 722
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 56/172 (32.56%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGF-TYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALE 513 AG+EKK+ L EK VA HEAGHAV G + + P + K+SI+PR ALG+ +Y P +D+YL+ ++ ++ L GR +EE+ + +I++GA DD ++ T MA + +YG++ T+G ++ + + + P+ Q++D E++ L++ A E Sbjct: 541 AGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDP----LLKVSIIPR-AQALGYASYLP--KDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRETVQK-----PFSEATAQMID---EEIRKLVKHAYE 697
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15 Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQRE 483 G+EKK + E+ VA HE+GHAV G + P + K++I+PR ALGF NE+ L+ ++L LGGRAAE+V GRISTGA +D+ + T M Y +A YG + IG +S E P+ G ++D RE Sbjct: 573 GLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLI-GRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQ------REDEFSKPYSNRTGAMIDEEVRE 719
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 62/188 (32.98%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG+E T+ G K +VA HE GHAV T A G V+K++++PR G A G T + P ED L+ ++ +V LGGRAAEEV + ++TGA D+++ T +A + + +G++ IGP ++A ++ G D + +L + V+ ++ A EVA VR N ++ L Sbjct: 464 AGLEG-TSMTDGKSKMLVAYHEIGHAVCATLTA----GHDEVQKVTLIPR-GQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARRMVTAFGMSE-IGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQL 644
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 62/187 (33.16%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG+E T + G KA+VA HE GHA+ T L G V+K++++PR G A G T+ ED L+ +L R+V LGGRAAE+V + I+TGA D+++ T++A + + +G++ IGP ++ + D + +L + + VK ++ A EVA VR N + ++ L Sbjct: 466 AGMEG-TKMIDGKSKAIVAYHEVGHAICAT----LTEGHDPVQKVTLVPR-GQARGLTWFLPGEDPTLVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIARQMVTMFGMSE-IGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKL 645
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 60/193 (31.09%), Postives = 96/193 (49.74%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDL-------VQREVKALLQSALEVALCVVRANPDVLEGL 561 G E++T + +K A HEAGHA+VG L+P V K++I+PR G ALG T+ D+ + +L +L TL GR AE++ Y ISTGA +DI+ AT++A + ++G + +GP+ E G V GR + + + EV+A++ A ++ N D+L + Sbjct: 140 GPERRTMIMTDKQKESTAYHEAGHAIVGY----LVPEHDPVHKVTIIPR-GRALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYT--------EDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAM 319
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14 Identity = 60/193 (31.09%), Postives = 96/193 (49.74%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDL-------VQREVKALLQSALEVALCVVRANPDVLEGL 561 G E++T + +K A HEAGHA+VG L+P V K++I+PR G ALG T+ D+ + +L +L TL GR AE++ Y ISTGA +DI+ AT++A + ++G + +GP+ E G V GR + + + EV+A++ A ++ N D+L + Sbjct: 394 GPERRTMIMTDKQKESTAYHEAGHAIVGY----LVPEHDPVHKVTIIPR-GRALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYT--------EDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAM 573
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.591e-14 Identity = 57/199 (28.64%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 1 EAGIEKKTAKLKGSE------KAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD-------QGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 E I+K A L+GS K ++A HEAGHAV T LP V+K++++PR A G T+ N+D++L+ ++ +++ L GRA EE+ + ++ GA +DI++ T MA + + ++G+++ +GP+ ++ S V GRD ++V V EV+++L+ A ++ N +++ Sbjct: 405 EDSIDKIIAGLEGSPLADSRIKRLIAYHEAGHAVAAT----FLPHHDPVQKVTLIPRRQ-AKGLTWFLPNDDQFLVSKSQILSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSK-VGPIC--------LENSSSEVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLID 589
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14 Identity = 54/186 (29.03%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 G+ +++ + EK + A HE GHA+VG + P + K +I+PR G ALG D Y +++ + + GR AEE+ + ++++GA DI+ AT++A + + GL+ IGP+ SSG D+ G P +L+ EVK ++ E A ++ + D L L Sbjct: 398 GVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASP----IHKATIIPR-GNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHG--SSG--DDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTL 574 The following BLAST results are available for this feature:
BLAST of CN189313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189313 ID=CN189313; Name=CN189313; organism=Citrus sinensis; type=EST; length=784bpback to top |