CN189313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPW-GRDQGQLVDL-------VQREVKALLQSALEVALCVVRANPDVLEGL 561 G +K + EK + A HE GH + A+ + P + K++IL R G G ED+ L E+ +LV +GGRAAEE+ + +TGA+ DI +AT +A + E+G++ +G V S G P+ GR G D + EV+ L+++A A ++ DVL+ L Sbjct: 406 GPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEP----IYKVTILAR-GRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFR-EPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYG---------SEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTL 583
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPW-GRDQGQLVDL-------VQREVKALLQSALEVALCVVRANPDVLEGL 561 G +K + EK + A HE GH + A+ + P + K++IL R G G ED+ L E+ +LV +GGRAAEE+ + +TGA+ DI +AT +A + E+G++ +G V S G P+ GR G D + EV+ L+++A A ++ DVL+ L Sbjct: 406 GPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEP----IYKVTILAR-GRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFR-EPTTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYG---------SEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTL 583
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPW-GRDQGQLVDL-------VQREVKALLQSALEVALCVVRANPDVLEGL 561 G +K + EK + A HE GH + A+ + P + K++IL R G G ED+ L E+ +LV +GGRAAEE+ + +TGA+ DI +AT +A + E+G++ +G V S G P+ GR G D + EV+ L+++A A ++ DVL+ L Sbjct: 406 GPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEP----IYKVTILAR-GRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFR-EPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYG---------SEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTL 583
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.682e-11 Identity = 57/179 (31.84%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQ-------LVDLVQREVKALLQSALEVA 519 AG KK E+ +VA HEAGHA+VG +L V K++++PR G G+ +E+ L +L +L+GGR EE+ + G + GA +DI +AT +A + EYG+++ +G VS E V GRD GQ ++ EV+ +L A + A Sbjct: 436 AGPAKKDRIQSMREREIVAYHEAGHAIVGL----VLENGSTVRKVTVVPR-GRIGGYMLALPDEEIMQPTNFHLQDQLASLMGGRLGEEIVF-GVATPGASNDIEKATHIARSMVTEYGMSKKLGMVSY---------EGDHQVFIGRDYGQTKTYSEATAVMIDDEVRRILGEAYDRA 599
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 51/165 (30.91%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 19 KTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSG-RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSAL 510 K L V A HEAGHA+V A +P + K++I+PR G A G T +D + +L +L L+GGR EE+ + +++ GA DD R+AT +A + +G + IGP I + E+ DL+ +EV LL +L Sbjct: 410 KRRPLDDQTNRVSAFHEAGHALVALLTADSIP----LHKVTIIPR-GEAGGLTSFLQEKDISFMTRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPDTQDEQLGEA------------TRDLIDKEVDQLLNDSL 557 The following BLAST results are available for this feature:
BLAST of CN189313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189313 ID=CN189313; Name=CN189313; organism=Citrus sinensis; type=EST; length=784bpback to top |