EY676442

Overview
NameEY676442
Unique NameEY676442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_CUCPE (Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.952e-30
Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLGGDDGSLAF+P+ FSV +GEKIVFKNNAGFPHNVVF+E+EIPSGVD  KISM+ +DLLN PGE Y V L EK +  F    PHQG  M G+
Sbjct:    2 EVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYKVNLTEKGSYSFYCS-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 4.529e-30
Identity = 66/95 (69.47%), Postives = 71/95 (74.74%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG DDGSLAFVPS F+V  GEKIVFKNNAGFPHNVVF+E+EIPSGVD SKISM    LLNG GE Y VTL E  +  F    PHQG  M G+
Sbjct:   74 EVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCA-PHQGAGMVGK 167          

HSP 2 Score: 26.9498 bits (58), Expect = 4.529e-30
Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 1
Query:   49 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVG 156
            GLK   +      ST+  S SA    PKL++K++LKD G
Sbjct:   16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFG 54          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_LACSA (Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30
Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG  DG L F PS+FSV SGEKIVFKNNAGFPHNVVF+E+EIP+GVD SKISMS +DLLN PGE YAVTL EK    F    PHQG  M G+
Sbjct:    2 EVLLGSSDGGLVFEPSTFSVASGEKIVFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAPGETYAVTLTEKGTYSFYCA-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_SOLTU (Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.150e-29
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            +VLLGGDDGSLAF+P +FSV++GEKI FKNNAGFPHNVVF+E+EIP+GVD SKISM+ +DLLN  GE Y+VTL EK    F    PHQG  M G+
Sbjct:    2 DVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMAEEDLLNAAGETYSVTLSEKGTYTFYCA-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_SOLCR (Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.502e-29
Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG DDG LAFVP +FS+++GEKI FKNNAGFPHNVVF+E+EIP+GVD SKISM  +DLLN PGE Y+VTL EK    F    PHQG  M G+
Sbjct:    2 EVLLGSDDGGLAFVPGNFSISAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVTLSEKGTYSFYCS-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_CUCSA (Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.707e-29
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            E+LLGGDDGSLAFVP++F+V SGEKI FKNNAGFPHNVVF+E+EIPSGVD  KISM+ +DLL+ PG+ Y V L +K +  F    PHQG  M G+
Sbjct:    2 EILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDSGKISMNEEDLLBAPGZVYZVZLTZKGSYSFYCS-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.266e-29
Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG  DG LAFVPSS  V++GE IVFKNNAGFPHNVVF+E+EIP+GVD SKISM  +DLLN PGE Y+V L  K    F    PHQG  M GQ
Sbjct:   71 EVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCS-PHQGAGMVGQ 164          

HSP 2 Score: 26.1794 bits (56), Expect = 8.266e-29
Identity = 13/36 (36.11%), Postives = 19/36 (52.78%), Query Frame = 1
Query:   49 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVG 156
            GLK  A       + +  S S  P+L ++A+LKD G
Sbjct:   16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFG 51          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.169e-28
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLGG DGSLAF+P+ FS+  GEKIVFKNNAG+PHNVVF+E+EIPSGVDV+KISM  +DLLNG GE Y V L E     F    PHQG  M G+
Sbjct:   70 EVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCA-PHQGAGMVGK 163          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_CAPBU (Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.309e-28
Identity = 64/95 (67.37%), Postives = 69/95 (72.63%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLGG DGSLAFVP+ FS+  GEKIVFKNNAGFPHNVVF+E+EIPSGVD SKISM   DLLN  GE Y V L E     F    PHQG  M G+
Sbjct:    2 EVLLGGGDGSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDENDLLNAAGETYEVALTEAGTYSFYCA-PHQGAGMVGK 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_PHAVU (Plastocyanin OS=Phaseolus vulgaris GN=PETE PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.406e-27
Identity = 64/95 (67.37%), Postives = 70/95 (73.68%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG  DGSL FVPS FSV SGEKIVFKNNAGFPHNVVF+E+EIP+GVD  KISM  ++LLN PGE Y VTL  K    F    PHQG  M G+
Sbjct:    2 EVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCS-PHQGAGMVGK 95          
The following BLAST results are available for this feature:
BLAST of EY676442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLAS_CUCPE3.952e-3069.47Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1[more]
PLAS1_ARATH4.529e-3069.47Plastocyanin minor isoform, chloroplastic OS=Arabi... [more]
PLAS_LACSA8.804e-3070.53Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1[more]
PLAS_SOLTU1.150e-2967.37Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=... [more]
PLAS_SOLCR1.502e-2967.37Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1[more]
PLAS_CUCSA5.707e-2965.26Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1[more]
PLAS_PEA8.266e-2966.32Plastocyanin, chloroplastic OS=Pisum sativum GN=PE... [more]
PLAS2_ARATH2.169e-2866.32Plastocyanin major isoform, chloroplastic OS=Arabi... [more]
PLAS_CAPBU6.309e-2867.37Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE... [more]
PLAS_PHAVU1.406e-2767.37Plastocyanin OS=Phaseolus vulgaris GN=PETE PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676442 ID=EY676442; Name=EY676442; organism=Citrus sinensis; type=EST; length=867bp
ACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCACCGG
CCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATGAAGG
CCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAAAGAT
GTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTAGCAA
TGCCATGGCCATTTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTGGCT
TTTGTTCCAAGCTCTTTCTCTGTCAACTCCGGTGAAAAGATTGTGTTCAA
GAACAATGCTGGGTTCCCACACAACGTTGTTTTCAATGAAAATGAAATTC
CGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAAAAGACCTTCTC
AATGGTCCTGGAGAAGATTATGCTGTTACTCTGATTGAAAAAAAGGCCTT
ACCCTTCCAACTGGGTCCCCCTCACCAAGGAACTAGCATGGGTGGACAAA
GAGAACGGTAAATTAAGTTTCAAATCAGGAATTTGGTTTGGCCACAACAA
CTTGGTTACCTTTCTCTCCTTTTTGCACTTTAAGAATACCAGACATGATT
TTCATTTTGGGGAAAAAAAATGTTAAGTGGGGGAAACATTTCAACCAAAC
CAAAAAGACCTTTCTGTTATTTCCATTTTTAAAAAAAATAAAGAAAAAAA
AAAAAAAAATAGGGGGGGGCCGCCGCTTAGAGTTCAGAGACTCTAATTAA
GCAGTAGGGAGGCGATATAAGAAAGCCTTCTATAATAAAGCAGCCAATTT
ATAAAATCAATGGAGTGAATTTGTATAAACATAAGACAGAATTGGGGAAA
ACCCGAGGGATTATCGA
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