EY676442

Overview
NameEY676442
Unique NameEY676442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.398e-27
Identity = 62/95 (65.26%), Postives = 71/95 (74.74%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG  DG LAFVP+SF V++G+ IVFKNNAGFPHNVVF+E+EIPSGVD +KISM  +DLLN PGE Y+V L  K    F    PHQG  M GQ
Sbjct:    2 EVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGETYSVKLDAKGTYKFYCS-PHQGAGMVGQ 95          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLGG DGSLAFVPS+  V +GE +VFKNNAGFPHNV+F+E+E+P GVD   ISM  +DLLN PGE ++VTL EK         PHQG  M G+
Sbjct:   69 EVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCS-PHQGAGMAGK 162          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26
Identity = 57/94 (60.64%), Postives = 69/94 (73.40%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGG 496
            EVL+GG  G LAF+P+   VN+GE+IVFKNNAGFPHNV+F+E+ +P+GVDVS ISMS +DLLN PGE Y V L +K    F    PHQG  M G
Sbjct:    2 EVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRF-FCAPHQGIGMSG 94          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.743e-23
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EV LG DDG+L F PSSFSV  GE I FKNNAGFPHN+VF+E+E+P+GVDVSKIS   +D L+G GE + VTL EK    F    PH G  M G+
Sbjct:    2 EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYC-EPHAGAGMKGE 93          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.361e-22
Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EV LG DDG L F PSSF+V +GEKI FKNNAGFPHN+VF+E+E+P+GV+  KIS    + LNG GE Y VTL EK    F    PH G  M G+
Sbjct:    2 EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQ--PEYLNGAGETYEVTLTEKGTYKFYC-EPHAGAGMKGE 93          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHNVVF+E+ +PSGVDVSKIS   ++ LN PGE ++VTL       F    PH G  M G+
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYC-EPHAGAGMVGK 150          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHNVVF+E+ +PSGVDVSKIS   ++ LN PGE ++VTL       F    PH G  M G+
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYC-EPHAGAGMVGK 150          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  215 EVLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            +VLLG + G L F P+ FSV +GE I FKNNAG+PHNVVF+E+ +PSGVDVSKIS   ++ L  PGE ++VTL       F    PH G  M G+
Sbjct:   60 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYC-EPHAGAGMVGK 151          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_ULVPE (Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17
Identity = 50/94 (53.19%), Postives = 59/94 (62.77%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLG---PPHQGTSM 490
            V LGGDDGSLAFVPS  SV +GE I F NNAGFPHN+VF+E+ +P+GVD   IS    D LN  GE    T++ K + P   G    PH G  M
Sbjct:    4 VKLGGDDGSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYD--DYLNSKGE----TVVRKLSTPGVYGVYCEPHAGAGM 91          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_ULVAR (Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.547e-17
Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLG---PPHQGTSM 490
            V LGGDDG+LAFVPS  SV +GE I F NNAGFPHN+VF+E+ +P+GVD   IS    D LN  GE    T++ K + P   G    PH G  M
Sbjct:    4 VKLGGDDGALAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYD--DYLNSKGE----TVVRKLSTPGVYGVYCEPHAGAGM 91          
The following BLAST results are available for this feature:
BLAST of EY676442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLAS_VICFA2.398e-2765.26Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1[more]
PLAS_FRIAG3.462e-2661.05Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]
PLAS_GINBI7.713e-2660.64Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1[more]
PLAS_DAUCA2.743e-2360.00Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1[more]
PLAS_PETCR1.361e-2257.89Plastocyanin A/B OS=Petroselinum crispum GN=PETE P... [more]
PLAS_ORYSJ2.174e-2055.79Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_ORYSI2.174e-2055.79Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_HORVU5.354e-1952.63Plastocyanin, chloroplastic OS=Hordeum vulgare GN=... [more]
PLAS_ULVPE3.837e-1753.19Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1[more]
PLAS_ULVAR8.547e-1752.13Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676442 ID=EY676442; Name=EY676442; organism=Citrus sinensis; type=EST; length=867bp
ACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCACCGG
CCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATGAAGG
CCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAAAGAT
GTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTAGCAA
TGCCATGGCCATTTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTGGCT
TTTGTTCCAAGCTCTTTCTCTGTCAACTCCGGTGAAAAGATTGTGTTCAA
GAACAATGCTGGGTTCCCACACAACGTTGTTTTCAATGAAAATGAAATTC
CGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAAAAGACCTTCTC
AATGGTCCTGGAGAAGATTATGCTGTTACTCTGATTGAAAAAAAGGCCTT
ACCCTTCCAACTGGGTCCCCCTCACCAAGGAACTAGCATGGGTGGACAAA
GAGAACGGTAAATTAAGTTTCAAATCAGGAATTTGGTTTGGCCACAACAA
CTTGGTTACCTTTCTCTCCTTTTTGCACTTTAAGAATACCAGACATGATT
TTCATTTTGGGGAAAAAAAATGTTAAGTGGGGGAAACATTTCAACCAAAC
CAAAAAGACCTTTCTGTTATTTCCATTTTTAAAAAAAATAAAGAAAAAAA
AAAAAAAAATAGGGGGGGGCCGCCGCTTAGAGTTCAGAGACTCTAATTAA
GCAGTAGGGAGGCGATATAAGAAAGCCTTCTATAATAAAGCAGCCAATTT
ATAAAATCAATGGAGTGAATTTGTATAAACATAAGACAGAATTGGGGAAA
ACCCGAGGGATTATCGA
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