EY676442

Overview
NameEY676442
Unique NameEY676442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_ENTPR (Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.547e-17
Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLG---PPHQGTSM 490
            V LGGDDGSLAFVP++ +V +GE I F NNAGFPHN+VF+E+ +P+GVD   I  S +D LN  G+    T++ K   P   G    PH G  M
Sbjct:    4 VKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAI--SAEDYLNSKGQ----TVVRKLTTPGTYGVYCDPHSGAGM 91          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.547e-17
Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            V LG D G+L FVP + ++ SGE + F NNAGFPHN+VF+E+ IPSGV+   IS    D LN PGE Y+V L       +    PHQG  M G+
Sbjct:   51 VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRD--DYLNAPGETYSVKLTAAGEYGYYC-EPHQGAGMVGK 141          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.487e-16
Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGG 496
            V +GGDDG+L F P   SV +GE + F NN GFPHNVVF+E+ +P+GV    I  + +D LNGP E +++T        F    PHQG  M G
Sbjct:   74 VKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDI--NHEDYLNGPNESFSITFKTPGTYEFYC-EPHQGAGMKG 163          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_CHLFU (Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGG 496
            V LG D G+L F PSS ++ +GE + + NNAGFPHN+VF+E+E+PSG +    ++S +D LN PGE Y+          +    PHQG  M G
Sbjct:    4 VKLGADSGALVFEPSSVTIKAGETVTWVNNAGFPHNIVFDEDEVPSGANAE--ALSHEDYLNAPGESYSAKFDTAGTYGY-FCEPHQGAGMKG 93          
BLAST of EY676442 vs. ExPASy Swiss-Prot
Match: PLAS_SCEOB (Plastocyanin, chloroplastic OS=Scenedesmus obliquus GN=PETE PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.712e-14
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 2
Query:  218 VLLGGDDGSLAFVPSSFSVNSGEKIVFKNNAGFPHNVVFNENEIPSGVDVSKISMSTKDLLNGPGEDYAVTLIEKKALPFQLGPPHQGTSMGGQ 499
            V LG D G+L F P++ ++ +G+ + + NNAGFPHN+VF+E+ +P+GV+    ++S  D LN PGE Y           +    PHQG  M G+
Sbjct:   51 VKLGADSGALVFEPATVTIKAGDSVTWTNNAGFPHNIVFDEDAVPAGVNAD--ALSHDDYLNAPGESYTAKFDTAGEYGY-FCEPHQGAGMVGK 141          

HSP 2 Score: 23.0978 bits (48), Expect = 2.712e-14
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1
Query:   55 KAGATPARVVGSTMKASAS 111
            KA   PA+   +T+KASAS
Sbjct:    7 KAAVAPAKATRTTVKASAS 25          
The following BLAST results are available for this feature:
BLAST of EY676442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLAS_ENTPR8.547e-1750.00Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=... [more]
PLAS_CHLRE8.547e-1748.94Plastocyanin, chloroplastic OS=Chlamydomonas reinh... [more]
PLAS_PHYPA2.487e-1646.24Plastocyanin, chloroplastic OS=Physcomitrella pate... [more]
PLAS_CHLFU2.105e-1544.09Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1[more]
PLAS_SCEOB2.712e-1439.36Plastocyanin, chloroplastic OS=Scenedesmus obliquu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676442 ID=EY676442; Name=EY676442; organism=Citrus sinensis; type=EST; length=867bp
ACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCACCGG
CCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATGAAGG
CCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAAAGAT
GTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTAGCAA
TGCCATGGCCATTTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTGGCT
TTTGTTCCAAGCTCTTTCTCTGTCAACTCCGGTGAAAAGATTGTGTTCAA
GAACAATGCTGGGTTCCCACACAACGTTGTTTTCAATGAAAATGAAATTC
CGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAAAAGACCTTCTC
AATGGTCCTGGAGAAGATTATGCTGTTACTCTGATTGAAAAAAAGGCCTT
ACCCTTCCAACTGGGTCCCCCTCACCAAGGAACTAGCATGGGTGGACAAA
GAGAACGGTAAATTAAGTTTCAAATCAGGAATTTGGTTTGGCCACAACAA
CTTGGTTACCTTTCTCTCCTTTTTGCACTTTAAGAATACCAGACATGATT
TTCATTTTGGGGAAAAAAAATGTTAAGTGGGGGAAACATTTCAACCAAAC
CAAAAAGACCTTTCTGTTATTTCCATTTTTAAAAAAAATAAAGAAAAAAA
AAAAAAAAATAGGGGGGGGCCGCCGCTTAGAGTTCAGAGACTCTAATTAA
GCAGTAGGGAGGCGATATAAGAAAGCCTTCTATAATAAAGCAGCCAATTT
ATAAAATCAATGGAGTGAATTTGTATAAACATAAGACAGAATTGGGGAAA
ACCCGAGGGATTATCGA
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