CN189296

Overview
NameCN189296
Unique NameCN189296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 2
Query:  236 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAG----VVKGFMGAGQYGRLAGG-ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVSLGHYP 769
            R  I+EF+ TF  ++    +   V  +      +G  G+A+AFG  +  + Y   GISGGH NPAV++GL +A K      + Y+V Q LGA+  A     ++ G  GA   G  A G       GY+    L  EII T   +  +  +T  +       VP+  AP+ IG A+ L+ L   P
Sbjct:    3 RKFISEFLGTFWLVFGGCGSA--VFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIP 177          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 2
Query:  236 RAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA------EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 733
            RA +AE I TFLF++  V + M  G +      + VG+  +A A   ++ V+V     +SGGHINPAVTLGL    +++L R+  Y+  Q LG+   A ++  F+     G       V  H    G G+GA      E + TF L++ V++     R A     P+L  L +G
Sbjct:   19 RAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTL-ACLLLAFLAVADSG-------VPVHAL--GAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVG 182          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 2
Query:  239 AGIAEFIATFLFLYISVLTV------MGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG----ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 748
            A + EF  TF+FL+ + +        + +V +        +  IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S TR +   V Q         +V G    G    +  G    AN +  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQ---------IVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFI 216          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 61/205 (29.76%), Postives = 94/205 (45.85%), Query Frame = 2
Query:  161 DGKDYVEPPPAP----LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFL 748
            D +D  + P AP    +   G   S++F +  +AEF+ATF  ++      +G +    K   V   G+A A+G  +  +VY    +SG H+NPAVTLG  +A +    RA  Y + Q   A   A VV   M  G++      L GGA+           L  E + TF L++ + + ATD      D  V  +A + +G  + L
Sbjct:   28 DKEDDHQNPQAPDGGDVVVCGMPMSFTFLQMLLAEFLATFFLMFAG----LGAITVEEKKGAVTFPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQ-TAAATAASVVLRLMFGGRHAPVPATLPGGAH--------AQSLVIEFVITFYLMFVIMAVATD------DQAVGHMAGVAVGGTIML 213          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 54/185 (29.19%), Postives = 83/185 (44.86%), Query Frame = 2
Query:  245 IAEFIATFLFLY-------ISVLTVMGVVKSNTKCSTVGIQG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSL 757
            IAEFI TF+ ++       ++++   G    N     +G+ G       I  AFG  I   +Y    ISG HINPAVT+GL+  +K      + Y++ Q LGA  G+ +     G G       GA     G +    + AE++GTF+L+ T+      +R+            P GFA  ++ L
Sbjct:    9 IAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERA------------PKGFAGIIIGL 181          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 55/181 (30.39%), Postives = 83/181 (45.86%), Query Frame = 2
Query:  239 AGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG--------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSL 757
            A + EF  TF+FL+ +   V+  V ++    T   +G        IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S  R +     Q +     AG+  G   +          N +  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+  +
Sbjct:   50 AAVGEFCGTFMFLWCAY--VICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQII-----AGMAAGGAASAMTPGKVLFTNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHM 218          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  236 RAGIAEFIATFLFLYISVLTVMGV----VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIG---TFVLVYTVFSATDAK 682
            RA  AEF +TFLF++I+V + +          +  S++    +A AFG  +F  V+  A +SGGH+NPAVT    +   +++  A+FY   Q LG+   A +V  ++ AGQ    A     +A   T   G GA I+    TF++VYTV  A D +
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTF-ACLVLHYISAGQ----AVPTTRIAVEMT---GFGAGILEGVLTFMVVYTVHVAGDPR 163          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 56/182 (30.77%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  221 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVL---------VYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGF 736
            S +  R  ++EFI+TF F    VL  +G V S+ K     + G    FG +I  +         VY +  +SGGH+NPAVT  + +A ++S+  A+FY   Q + ++    V+K  +             +   G +  +G+ A     FVLVYTVF+A+D +R      +P+ + P+ IGF
Sbjct:   18 SMNALRCYVSEFISTFFF----VLAAVGSVMSSRKLMAGDVSG---PFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLA-----FVLVYTVFTASDPRRG-----LPLAVGPIFIGF 182          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  221 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 532
            S +F RA ++EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S  RALFY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 57/185 (30.81%), Postives = 87/185 (47.03%), Query Frame = 2
Query:  200 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVM-----GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 733
            FE  E+      RA +AE + TFLF++  V   M     G        +T+    IA A    + V    TAG  +SGGH+NPAVT+GL +   ++  RA+ Y+  Q L A   A V+  F+  G    +    + +  G +   GL  E+I TF L++  ++     RS   +  P+L  L +G
Sbjct:   12 FEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLV----TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLL-ASSAACVLLRFLSGG----MVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRSQVRAIGPLLTGLIVG 187          
The following BLAST results are available for this feature:
BLAST of CN189296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
AQPZ1_AGRT51.844e-1232.07Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP44_MAIZE2.409e-1232.76Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
AQY1_YEAST2.409e-1230.56Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
NIP14_ORYSJ5.366e-1229.76Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTM5.366e-1229.19Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQY2_YEAST7.009e-1230.39Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
TIP51_ORYSJ2.039e-1134.62Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH2.039e-1130.77Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
AQP2_PROHA2.663e-1139.42Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
TIP41_MAIZE3.478e-1130.81Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189296 ID=CN189296; Name=CN189296; organism=Citrus sinensis; type=EST; length=782bp
GAGGCATCAAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGACTAT
TTTGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAAGAGGATGTT
AGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGC
TCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCGCCGCTCT
TCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCC
GAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGAT
GGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGA
TTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCT
GGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTT
GGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGT
GTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCATGGGTGCC
GGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTA
CACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTG
TCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCT
CATGTTCCTATTTTGGCTCCTCTGCCCATTGGGTTCGCTGTGTTTTTGGT
TTCACTTGGCCACTATCCCAATTACCGGAACT
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