CN189296

Overview
NameCN189296
Unique NameCN189296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 60/189 (31.75%), Postives = 84/189 (44.44%), Query Frame = 2
Query:  248 AEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAIC-----------GAG--VVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            AEF+ TF      VL   G  V+ +      +G  G+A AFG  +  + Y    ISG H+NPAV++GL+   +    +   Y+V Q LGAI            GAG  V KGF   G      GG +++A        L  E++ T   +  +  ATD +  A        APL IG A+ L+ L   P
Sbjct:    6 AEFLGTFWL----VLGGCGSAVLAAGFPNLGIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLA-------ALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIP 177          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 2
Query:  335 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-----------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVSLGHYP 769
            +G+ G+++AFG  +  + Y   GISGGH NPAV++GL +A ++     + Y++ Q  GAI  A V+            G   A  YG  + G      GY+    L  E++ T   +  +  +T        S VP+  AP+ IG  + L+ L   P
Sbjct:   34 IGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPG------GYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIP 177          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 59/189 (31.22%), Postives = 83/189 (43.92%), Query Frame = 2
Query:  230 FYRAGIAEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF-MGAGQYGRLAGGANVVAHG------YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            F R G AEF  TF      VL   G  V+ +      +G  G+A AFG  +  + Y    ISGGH NPAVT+GL  + +        Y+V Q +GAI  A  +     G   +  +A       +G      Y+    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ L+ L   P
Sbjct:    5 FKRCG-AEFFGTFWL----VLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIP 182          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 59/189 (31.22%), Postives = 83/189 (43.92%), Query Frame = 2
Query:  230 FYRAGIAEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF-MGAGQYGRLAGGANVVAHG------YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            F R G AEF  TF      VL   G  V+ +      +G  G+A AFG  +  + Y    ISGGH NPAVT+GL  + +        Y+V Q +GAI  A  +     G   +  +A       +G      Y+    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ L+ L   P
Sbjct:    5 FKRCG-AEFFGTFWL----VLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIP 182          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  221 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 532
            S +F RA  AEF+AT +F++  + + +     N + S   +  IA AFG  I  LV     ISG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 2
Query:  230 FYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTK--CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 742
            F R  +AEF  T   +YI   S L     V       C    +QG A+A       +++  +GISG  +NPAVT+G     ++ +   + +++ QC+GA+ GAG++K  +       L+  A  +A G     G   E++ T  LV+ V     A  +  D  +  +APL IG AV
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRVCLICLVQGFAFA------AIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYERDLS--ATTLATGVNVARGFFLEMVTTSFLVFVVLGV--AVYNEWDPKISRVAPLAIGCAV 195          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 57/203 (28.08%), Postives = 98/203 (48.28%), Query Frame = 2
Query:  170 DYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTKCSTVG--IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL-VSLG 760
            D ++ P   ++     K    ++   +EF+ T   +Y    SV     V   +   + +G  IQG+A A       L++  +G+SG ++NPAVTL   L+ ++ L  +L+Y+  Q LG I GAG++ G +    Y R+  G   +A G   G     E++ T +L   V     +  +  D  +  +AP  IG A+F+ V++G
Sbjct:   13 DPLKDPSKMIYRRPISKPVKAFKGFFSEFLGTLYLVYFCGGSVCAAFAVAGDSAARALLGGLIQGMALA------ALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCL-PNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGT--SVFNVWDRRLNRIAPFAIGLALFIGVAIG 205          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 2
Query:  215 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG-----GANVVAHGY--------TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVS 754
            LKS S  +  ++EF+ TF+ + +    V   + S  +    G+  I   F   + + +Y   G+SGGHINPAV+L + L  ++   +  FY+  Q LGA  GA  V G    G      G     G N  AH +        +  +    +++ T +L+  VF+  D++          L P+ IG  + +++
Sbjct:   18 LKS-SLAKETLSEFLGTFILIVLGCGCVAQAILSRGRFG--GVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRG---LEPIAIGLLIIVIA 204          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 56/187 (29.95%), Postives = 77/187 (41.18%), Query Frame = 2
Query:  230 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKG--------FMGAGQYGRLAGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSL 757
            F+R G AEF+ T + +   V + +    +N    +      AW FG M+ V  Y   GISGGH+NPAVT+ L + RK    +   Y+  Q  GA  G  +  G        F G       A G  +  +     T  +    E IGT VLV  +F+  D   S          P   G   F+V L
Sbjct:  309 FFREGFAEFLGTLVLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTPATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNS----------PPTQGMTAFIVGL 483          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 52/188 (27.66%), Postives = 82/188 (43.62%), Query Frame = 2
Query:  245 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-------------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            +AE I TF   +    +   V+ +      +G+ G++ AFG  +  + Y    ISG H+NPAVTLGL    +  + +   Y++ Q LGAI  A ++             KGF   G      G  N+VA           E++ T + ++ +  +T  K  A        APL IG A+ ++ L   P
Sbjct:    7 LAEMIGTFWLTFAGCGSA--VIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASGAAGFDLAKGFASNGYGAHSPGQYNLVA-------CFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIP 179          
The following BLAST results are available for this feature:
BLAST of CN189296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
AQPZ_CHRVO3.478e-1131.75Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPZ1_RHIME3.478e-1129.94Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQPZ_BORPA4.543e-1131.22Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR4.543e-1131.22Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQP2_TALEU4.543e-1139.42Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQPB_DICDI5.933e-1130.11Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQPA_DICDI5.933e-1128.08Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
AQP9_HUMAN5.933e-1126.42Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1[more]
YI7H_SCHPO7.749e-1129.95Uncharacterized membrane protein C977.17 OS=Schizo... [more]
AQPZ_RHOPA7.749e-1127.66Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189296 ID=CN189296; Name=CN189296; organism=Citrus sinensis; type=EST; length=782bp
GAGGCATCAAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGACTAT
TTTGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAAGAGGATGTT
AGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGC
TCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCGCCGCTCT
TCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCC
GAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGAT
GGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGA
TTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCT
GGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTT
GGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGT
GTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCATGGGTGCC
GGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTA
CACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTG
TCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCT
CATGTTCCTATTTTGGCTCCTCTGCCCATTGGGTTCGCTGTGTTTTTGGT
TTCACTTGGCCACTATCCCAATTACCGGAACT
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