CN189296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.354e-22 Identity = 69/179 (38.55%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 +F++A AEF+A +F+ +SV + + S V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ V L IGF+ V++GH Sbjct: 33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSV----ALAIGFS---VAIGH 201
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.380e-22 Identity = 68/179 (37.99%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 +F++A AEF+A +F+ +SV + + S V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ + L IGF+ V++GH Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFS---VAIGH 204
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVSLGH 763 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+TL L + ++SL RA+FY+V Q +GAI GAG++ G G LA N + + T G + E+I TF L +FS+TD++R++ P+ +P L IG + V+LGH Sbjct: 4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLS---VTLGH 173
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.471e-22 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 +F++A AEF+A +F+ +S+ + + K V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G +V T G GL E+I TF LV+T+F++ D+KR+ + L IGF+ V++GH Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFS---VAIGH 201
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.274e-21 Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 +F++A AEF+A +F+ +S+ T+ K N V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ + L IGF+ V++GH Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFS---VAIGH 201
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21 Identity = 67/185 (36.22%), Postives = 103/185 (55.68%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVSLGH 763 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+TL L + ++SL RA FY+ Q +GAI GAG++ G G LA N + + T+G + E+I TF L +F++TD++R++ P+ +P L IG + V+LGH Sbjct: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLS---VTLGH 173
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21 Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVSLGH 763 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+TL L + ++SL RA+FY+ Q +GAI GAG++ G LA N +++ T G + E+I TF L +FS+TD++R++ P+ +P L IG + V+LGH Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLS---VTLGH 173
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.409e-20 Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVSLGH 763 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+TL L + ++SL RA+FY+ Q +GAI GAG++ G LA N + + T G + E+I TF L +FS+TD++R++ P+ +P L IG + V+LGH Sbjct: 4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLS---VTLGH 173
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.840e-20 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 212 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 EL+S SF+RA +AEF+ + L+ T++G+ S G+ G A AFG LV +SGGHINPA+TL LA +LSL RAL Y++ Q LGA+ GAGV+ G A G L G + + G G E++ T + VF++ D + R P A LP+GF+ ++LGH Sbjct: 3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFS---LALGH 172
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 4.099e-20 Identity = 64/179 (35.75%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 227 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGH 763 +F++A AEF+A +F+ +S+ + + + K V + I+ FG I +V C ISGGHINPAVT+ + R++S+ +++FY+ QCLGAI GAG++ G L G V + G GL E+I TF LV+T+F++ D+KR+ + L IG + V++GH Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGIS---VAIGH 201 The following BLAST results are available for this feature:
BLAST of CN189296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189296 ID=CN189296; Name=CN189296; organism=Citrus sinensis; type=EST; length=782bpback to top |