CN189295

Overview
NameCN189295
Unique NameCN189295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = -1
Query:  347 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 664
            GY+    L  EI+   + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G A +Y  D      W+FWV P +GA L A+ ++++
Sbjct:  127 GYSLTSALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = -1
Query:  362 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 664
            GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+  ++       W+FWV P VGA + A+
Sbjct:  126 GYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = -1
Query:  362 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 664
            GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+  ++       W+FWV P VGA + A+
Sbjct:  126 GYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = -1
Query:  347 GYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 664
            G +  + L  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    L      G  +NPA S G A++      W+  W++WVGP +G GLA + ++V+
Sbjct:  137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGT----IAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = -1
Query:  362 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 664
            GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A ++         W+FWV P VGA + A+
Sbjct:  126 GYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  344 VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP-IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 676
            VV +  + G  +  E++ T  LV  VF++ D +++       + +P   IG +V L HL  I  TG  +NPARS G A+I  K   +  HWIFWVGP  GA LA+L +  ++
Sbjct:  131 VVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQT-------LASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = -1
Query:  350 VVAHGYTKGDG-LGA---EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQV 676
            V A G + G G L A   EI+ TF LVYTV++ A D K  +  +    +AP+ IGF V    LA    +G  +NPA + G A++      W +HW++W GP VG G+A L ++V
Sbjct:  130 VPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGT----IAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEV 236          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = -1
Query:  344 EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 634
            EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS   AI+    R + +HW++WVGP +G GL +L +  ++
Sbjct:  134 EIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 36/103 (34.95%), Postives = 54/103 (52.43%), Query Frame = -1
Query:  362 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGLAAL 664
            GY+    L  E++ TF  +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FW+ P  GA +A +
Sbjct:  126 GYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVG---GWALSQLWLFWIAPLFGAAIAGI 219          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = -1
Query:  344 VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 676
            VV +  + G  +  E++ T  LV  VF++ D++++       I      G +V L HL  I  TG  +NPARS G A+I  K   +  HWIFWVGP  GA LA+L +  ++
Sbjct:  131 VVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAMI------GTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGPLTGAVLASLIYNFIL 232          
The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQPZ_VIBVY1.216e-1134.91Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ_BRUAB1.216e-1137.62Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA21.216e-1137.62Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP11_ORYSJ2.075e-1136.45Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQPZ_BRUSU2.075e-1137.62Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQP6_MOUSE2.075e-1137.50Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
TIP11_ARATH2.709e-1139.47Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_CAVPO2.709e-1137.11Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPZ2_RHIME2.709e-1134.95Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQP6_RAT2.709e-1136.94Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bp
TTTTTTTTTTTTTTTTTAAAGAACTAGTTTTGTCCATATTATTACCAAGA
TGACATTGCACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCC
ACCTACTTAACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAA
ATTAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACAGAAAAGCAGGCCC
AGGTCCAGCACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAAT
ACACATAAGCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACG
AACGTTGATGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACG
ACTTGGTGGTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCA
AAAAATCCAGTGGTCATCCCAACCGCGGTCCTTGTTGTAAATGATTGCAG
CTCCAAGACTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTG
GCCAAGTGAACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAAT
AGGAACATGAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAAAAAA
CTGTGTAGACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCA
CCCTTGGTGTAGCCATGAGCTACAAC
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