CN189295

Overview
NameCN189295
Unique NameCN189295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.736e-50
Identity = 92/112 (82.14%), Postives = 102/112 (91.07%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            ++ GY+KG GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  166 LSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.736e-50
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  161 LADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRA 272          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.961e-50
Identity = 90/112 (80.36%), Postives = 102/112 (91.07%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            ++ GY+KG GLGAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  165 LSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.961e-50
Identity = 96/116 (82.76%), Postives = 100/116 (86.21%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            VA GY KG   GAE+IGTFVLVYTVFSATD KRSARDSHVPILAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK R WDDHWIFWVGPFVGA  AA YHQ V+RA   K
Sbjct:  156 VALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIK 271          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.867e-50
Identity = 93/116 (80.17%), Postives = 101/116 (87.07%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            VA GY+ G  LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDDHWIFWVGPFVGA  AA YHQ ++RA   K
Sbjct:  152 VADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIK 267          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 5.051e-50
Identity = 91/112 (81.25%), Postives = 100/112 (89.29%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  159 LADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRA 270          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50
Identity = 89/112 (79.46%), Postives = 102/112 (91.07%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            +A GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++YN  + W D WIFWVGPF+GA +AALYHQ+V+RA
Sbjct:  160 LAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 271          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = -1
Query:  338 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 673
            ++ GY+ G G+ AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAAIIYNKD+ WD HWIFWVGPF GA +AA YHQ V+RA
Sbjct:  160 LSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRA 271          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.470e-49
Identity = 90/116 (77.59%), Postives = 100/116 (86.21%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            +A GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGP +GA  AA YHQ ++RA   K
Sbjct:  161 LADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIK 276          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49
Identity = 91/116 (78.45%), Postives = 101/116 (87.07%), Query Frame = -1
Query:  326 VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 673
            VA GY+KG  LGAEIIGTFVLVYTVFSATD KRSARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGPF+GA  AA YHQ ++RA   K
Sbjct:  154 VADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIK 269          
The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
PIP23_MAIZE1.736e-5082.14Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ARATH1.736e-5082.14Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP22_ORYSJ2.961e-5080.36Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA2.961e-5082.76Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH3.867e-5080.17Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP22_ARATH5.051e-5081.25Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_ORYSJ6.597e-5079.46Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ARATH6.597e-5082.14Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_ARATH1.470e-4977.59Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH2.507e-4978.45Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bp
TTTTTTTTTTTTTTTTTAAAGAACTAGTTTTGTCCATATTATTACCAAGA
TGACATTGCACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCC
ACCTACTTAACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAA
ATTAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACAGAAAAGCAGGCCC
AGGTCCAGCACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAAT
ACACATAAGCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACG
AACGTTGATGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACG
ACTTGGTGGTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCA
AAAAATCCAGTGGTCATCCCAACCGCGGTCCTTGTTGTAAATGATTGCAG
CTCCAAGACTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTG
GCCAAGTGAACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAAT
AGGAACATGAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAAAAAA
CTGTGTAGACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCA
CCCTTGGTGTAGCCATGAGCTACAAC
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