CN189295

Overview
NameCN189295
Unique NameCN189295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:594..1271. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = -1
Query:  368 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 664
            G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +GA LA
Sbjct:  170 GCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = -1
Query:  344 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 658
            T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP VGA +A+L +  V+
Sbjct:  126 TAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = -1
Query:  341 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 658
            T G G+  E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARS G A++      W D W++WVGP VG  LA   +++  +
Sbjct:  140 TAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMG---NWTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = -1
Query:  344 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 658
            T G  +  E+  T  LV  +F++TD +RS           L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP VGA + +L +  ++
Sbjct:  126 TAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = -1
Query:  347 EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 634
            EI+ TF LVYTV++ A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W+GPFVGA +AAL + ++
Sbjct:  148 EIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGV---WDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = -1
Query:  368 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 664
            G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +G+ LA
Sbjct:  171 GCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  356 VAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 673
            VA G    +G+  EII TF LVYTV++ A D K+ +  +    +APL IG  V    LA  P +G  +NPARS G A+      G   HW++WVGP +G GLA L +
Sbjct:  133 VAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGT----IAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSG---HWVYWVGPLIGGGLAGLIY 232          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1
Query:  344 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 658
            T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP VGA + +L +  ++
Sbjct:  126 TAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = -1
Query:  344 VAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 673
            +A G +   G+  EII TF L++TV++   D K+ + D   P+L     GF V    LA    +G  +NPARS G A++      W DHW++WVGP +G GLA   ++ V+
Sbjct:  129 LASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          
BLAST of CN189295 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = -1
Query:  344 VAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 673
            +A G   G  +  E + TF  VY  ++   D KR     H+  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPF+GAGLA L ++ ++
Sbjct:  144 LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
The following BLAST results are available for this feature:
BLAST of CN189295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQY2_YEAST2.618e-1443.43Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQP2_BOVIN2.618e-1441.90Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP_AEDAE5.833e-1437.74Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP2_MOUSE5.833e-1440.00Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP12_ORYSJ7.618e-1442.27Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQY1_YEAST1.697e-1341.41Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP21_ARATH2.216e-1342.99Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP2_RAT2.216e-1339.05Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP41_ARATH4.938e-1337.84Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_MAIZE4.938e-1336.94Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189295 ID=CN189295; Name=CN189295; organism=Citrus sinensis; type=EST; length=676bp
TTTTTTTTTTTTTTTTTAAAGAACTAGTTTTGTCCATATTATTACCAAGA
TGACATTGCACAAATCCATAGCCATACAAATGTACAAAGTGACAGCGCCC
ACCTACTTAACCATGGGCCCATCCGTCATCATCATCCACCTCTCTTCAAA
ATTAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACAGAAAAGCAGGCCC
AGGTCCAGCACCAGCAGATTTGAACAAAGGACTAATTAATATTTTATAAT
ACACATAAGCAAACCAGCAACAGCCATAAACAAATGCAGGTGCAATCACG
AACGTTGATGAAGCGATCAGCTTCATTTGAAGGGAATGGCTCTGATCACG
ACTTGGTGGTACAAAGCTGCGAGTCCAGCTCCAACGAATGGTCCCACCCA
AAAAATCCAGTGGTCATCCCAACCGCGGTCCTTGTTGTAAATGATTGCAG
CTCCAAGACTCCTCGCTGGGTTGATGCCAGTTCCGGTAATTGGGATAGTG
GCCAAGTGAACCAAAAACACAGCGAACCCAATTGGCAGAGGAGCCAAAAT
AGGAACATGAGAGTCCCTGGCGCTCCGTTTGGCATCAGTGGCAGAAAAAA
CTGTGTAGACAAGAACAAAAGTACCAATAATCTCGGCACCAAGACCATCA
CCCTTGGTGTAGCCATGAGCTACAAC
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