CN189294

Overview
NameCN189294
Unique NameCN189294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.112e-16
Identity = 36/125 (28.80%), Postives = 71/125 (56.80%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEITAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+  R+++  +R+ELH +L++ +L+   +LV  NK+DLPNA++  ++  K+     + R     S      + +   L WL
Sbjct:   53 VGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 35/125 (28.00%), Postives = 71/125 (56.80%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEITAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +GFN+  +   N++  +WD+GGQ + R +W  Y +    ++++VD+ D++++  +++ELH +L++ +L+   +LV  NK+DLP A++  E+  K+     + R     S      + +   L WL
Sbjct:   53 VGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 35/125 (28.00%), Postives = 71/125 (56.80%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEITAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +GFN+  +   N++  +WD+GGQ + R +W  Y +    ++++VD+ D++++  +++ELH +L++ +L+   +LV  NK+DLP A++  E+  K+     + R     S      + +   L WL
Sbjct:   53 VGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 34/125 (27.20%), Postives = 71/125 (56.80%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEITAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +GFN+  +   N++  +WD+GGQ + R +W  Y +    ++++VD+ D+D++  +++ELH +L++ +L+   +LV  NK+D+P A++  E+  ++     + R     S      + +   L WL
Sbjct:   53 VGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARFRP_RAT (ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus GN=Arfrp1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 39/132 (29.55%), Postives = 74/132 (56.06%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEI-------TAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E+++   ++++ + L    +LV  NKQD+   ++  +I       T K+G     +R    Q+  A  G+G+ EG++W+
Sbjct:   57 VGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 39/132 (29.55%), Postives = 74/132 (56.06%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEI-------TAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E+++   ++++ + L    +LV  NKQD+   ++  +I       T K+G     +R    Q+  A  G+G+ EG++W+
Sbjct:   57 VGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEITAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            IGFN++ V   N++  +WD+GGQ + R +W  Y +    ++FVVDS DR++  +++  L  ++N+  L    LLV  NK DLPN+    E+   L       R     S  A     +   LDWL
Sbjct:   52 IGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKPPLAKIPLLVVANKNDLPNSAGVDEMIQNLDLRGIVGREVCCYSISAKNSVNIDITLDWL 176
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEI-------TAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E++    +++  + L    +LV  NKQD+   ++  +I       T+K+G     +R    Q+  A  G+G+ EG++W+
Sbjct:   57 VGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEI-------TAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E++    +++  + L    +LV  NKQD+   ++  +I       T+K+G     +R    Q+  A  G+G+ EG++W+
Sbjct:   57 VGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183
[Close]
BLAST of CN189294 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15
Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = -3 
Query:  249 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQTTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFVNKQDLPNAMNAVEI-------TAKLGFHFFRQRHWYIQSTCATFGEGLYEGLDWL 623
            +G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E++    +M+  + L    +LV  NKQD+   ++  +I        +K+G     +R    Q+  A  G+G+ EG++W+
Sbjct:   57 VGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCASKIG-----RRDCLTQACSALTGKGVREGIEWM 183
The following BLAST results are available for this feature:
BLAST of CN189294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
ARL8B_PONAB3.112e-1628.80ADP-ribosylation factor-like protein 8B OS=Pongo a... [more]
ARL8A_HUMAN6.933e-1628.00ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8A_CHICK6.933e-1628.00ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
ARL8A_XENTR1.183e-1527.20ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]
ARFRP_RAT1.183e-1529.55ADP-ribosylation factor-related protein 1 OS=Rattu... [more]
ARFRP_MOUSE1.183e-1529.55ADP-ribosylation factor-related protein 1 OS=Mus m... [more]
ARL8_DICDI2.017e-1533.60ADP-ribosylation factor-like protein 8 OS=Dictyost... [more]
ARFRP_PONAB2.017e-1529.55ADP-ribosylation factor-related protein 1 OS=Pongo... [more]
ARFRP_HUMAN2.017e-1529.55ADP-ribosylation factor-related protein 1 OS=Homo ... [more]
ARFRP_BOVIN2.634e-1529.55ADP-ribosylation factor-related protein 1 OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189294 ID=CN189294; Name=CN189294; organism=Citrus sinensis; type=EST; length=625bp
TTTTTTTTTTTCCTTTTTATTTTTTTTTTTTGAGGAAAGATAAACATTCC
AGAATTATTCTGAAGCTACCAAAAACAAATCTCAACGTTTGCAAGGGAAA
CAACAAACACAGTAAAACGGGCAACGAAGCTATTACAGGAAGGAAAGCAA
GAACACTTGAGATGGGTTGTTAACTCTGTATTTCAGCAGTTGCGGCAACC
CAAAACTCAAAATTTAGTTGTCTATGCCTTGTTTGCAATGTTGTTTGAAA
GCCAATCAAGTCCCTCATACAGCCCTTCACCAAAAGTGGCACATGTGCTC
TGGATATACCAGTGGCGCTGGCGAAAAAAGTGAAAGCCAAGCTTGGCAGT
TATCTCAACAGCATTCATTGCATTTGGAAGATCTTGCTTGTTAACAAATA
CAAGCAGCACAGCATCTCTCAATTCATCCTCATTCAACATTCTGTGCAAC
TCATCCCTAGCTTCTACCACACGGTCGCGATCATTACTGTCAACCACAAA
GATGAGTCCTTGGGTGGTTTGGAAATAATGTCTCCACAAAGGTCGGATCT
TGTCTTGACCCCCGACATCCCAGACAGTAAAGCTGATGTTCTTATACTCA
ACGGTCTCTACATTAAATCCAATGG
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