CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CANFA (Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.009e-35 Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = -2 Query: 181 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 594 SLRLEAGLCLYG+D+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+HS + + +G IG +TSG SPCLKKN+AMGYV S + GT + +EVR K ++KMPFV T YY Sbjct: 263 SLRLEAGLCLYGSDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCPSPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYY 400
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34 Identity = 73/138 (52.90%), Postives = 89/138 (64.49%), Query Frame = -2 Query: 181 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 594 SLRLEAGLCLYGND+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+ S + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K ++KMPFV T YY Sbjct: 257 SLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34 Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = -2 Query: 181 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 594 SLRLEAGLCLYGND+++H TPVE L+W +GKRRR F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++ +EVR K ++KMPFVPT YY Sbjct: 263 SLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYY 400
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_DICDI (Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum GN=gcvT PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.156e-33 Identity = 74/141 (52.48%), Postives = 92/141 (65.25%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 SLRLEAGLCLYG+D+ +TP+EA L W I KRRR EGGF GA I KQL +G P +RVG G PAR + D N IG++TSG SP +++I+M YVK+ K GT+V + +RGK I+KMPFVPT Y K Sbjct: 262 SLRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGTISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNYKK 402
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_YEAST (Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=GCV1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.813e-25 Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRR----AEGGFLGAEKILKQLDEGPPVR-RVGF--FAGGPPARSHSKVH-DEQGNPIGEITSGGFSPCLKK-NIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 SLRLEAG+CLYG+++++ +TPVEA L W I K RR + F G KI+ QL+ + RVGF GP AR+ K+ + +G +TSG SP L NI YV+ G HK GTK+ ++VR K Y + KMP VPT YYK Sbjct: 252 SLRLEAGMCLYGHELDESITPVEAALNWVISKSRRDLVDQKYWFNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLNNINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYYK 399
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.501e-20 Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = -2 Query: 172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594 +LRLEA + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L++ IA+GY+ + L + G +V++E+RGK + + K PF Y +PS Sbjct: 238 TLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVEVEIRGKHHRATVVKRPF----YRRPS 372
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_HALOH (Aminomethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.501e-20 Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLE G CLYGND++++ P+EAGL W + + + F+G +LK +EG + VGF G H + G+ IG +TSG SP L + I MGYV+ G + I VR +A G + K+PF+ Sbjct: 228 TLRLEKGYCLYGNDIDENTHPLEAGLGWTV---KFDKASFIGKRALLKYKEEGLSRKLVGFKLKGRGIPRHGYPIKDNGDQIGVVTSGSMSPTLSEGIGMGYVRYDKATPGESITIVVRNRAITGEVVKLPFI 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THEM4 (Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.572e-20 Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = -2 Query: 199 LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 591 LRLEA L LYGNDM++ +TP+E G+ WA+ + E F+G E + +QL+EG R GF H + G IG +TSG FSP L + I M ++ G +K+G ++IE+R K I KMPF Sbjct: 227 LRLEASLLLYGNDMDETITPLEVGIKWAV----KFEKDFMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEKG-YKSGEIIEIEIRNKLVKAEIVKMPF 352
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.277e-20 Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = -2 Query: 172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594 +LRLEA + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L + IA+GY+ + L + G +V +E+RGK + + K PF Y +PS Sbjct: 238 TLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVAVEIRGKHHPATVVKRPF----YRRPS 372
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PARD8 (Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 56/134 (41.79%), Postives = 73/134 (54.48%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND++ +P+EAGL W + AEG F ++ +Q EG + F H ++ D +GN IG +TSG SP LKK I MGYVK KAGT + I+VR K + K PF Sbjct: 229 TLRLEMGFCLYGNDLDDTTSPIEAGLGWIT---KFAEGKNFTNRAELERQKKEGVTRKLCAFELQEKGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQVVKAPF 359 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |