CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BURM9 (Aminomethyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V+P++AGL W + A F+G + + + G +++ AGG R+H KV G GEITSG FSP ++++IA V + G V +++R K + K+PFV Sbjct: 234 TLRLEAGMNLYGQDMDESVSPLDAGLAWTVD--LSAPRAFVGRDALEAHGSRAAFVGLILQKENGRAGG-VLRAHQKVATPHGE--GEITSGTFSPSMQESIAFARVPKDV-AIGDTVHVQIRDKQLPARVVKLPFV 364
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BURM7 (Aminomethyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V+P++AGL W + A F+G + + + G +++ AGG R+H KV G GEITSG FSP ++++IA V + G V +++R K + K+PFV Sbjct: 234 TLRLEAGMNLYGQDMDESVSPLDAGLAWTVD--LSAPRAFVGRDALEAHGSRAAFVGLILQKENGRAGG-VLRAHQKVATPHGE--GEITSGTFSPSMQESIAFARVPKDV-AIGDTVHVQIRDKQLPARVVKLPFV 364
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_XANAC (Aminomethyltransferase OS=Xanthomonas axonopodis pv. citri GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM+ VTP EAGL W I + F+G + Q +G P + +G H + N GEI SG FSP L K IA V +G + ++++++RGK K PFV Sbjct: 231 TLRLEAGMNLYGQDMDDGVTPYEAGLAWTIALDEGRD--FIGRSVLESQKAQGAPRQLIGVVMDEKGVLRHGQT-VLTANGEGEILSGTFSPTLGKAIAFARVPAG---SIEQLRVDIRGKQVPLRAVKFPFV 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_STAES (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -2 Query: 208 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITK 594 +LRLEAGL L+G D+ + +TP E G+ +A + E F+G + Q + G R VG G AR+ V DE N IG +TSG SP K+IA+ + + G KV +++R + + I K Sbjct: 230 TLRLEAGLPLHGQDLSESITPYEGGIAFA--AKPLIENHFIGKSVLKAQKENGSERRTVGLELLGKGIARTGYDVLDENSNEIGFVTSGTQSPSSGKSIALAIIDRDAFEMGKKVIVQIRKRQVEAKIVK 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_STAEQ (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -2 Query: 208 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITK 594 +LRLEAGL L+G D+ + +TP E G+ +A + E F+G + Q + G R VG G AR+ V DE N IG +TSG SP K+IA+ + + G KV +++R + + I K Sbjct: 230 TLRLEAGLPLHGQDLSESITPYEGGIAFA--AKPLIENHFIGKSVLKAQKENGSERRTVGLELLGKGIARTGYDVLDENSNEIGFVTSGTQSPSSGKSIALAIIDRDAFEMGKKVIVQIRKRQVEAKIVK 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PYRKO (Probable aminomethyltransferase OS=Pyrococcus kodakaraensis GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = -2 Query: 181 SLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 594 +LRLEAG LYGN+ ++ VTP++A L +AI + F+G E +LKQ + G P + V F G P + D G IGE+TSG SP L I + +VK G ++++E+RGK PF K Y Sbjct: 250 TLRLEAGYTLYGNETKEKQLLSTDIDEVTPLQANLDFAIFWDKE----FIGKEALLKQKERGLPSKMVHFKMVDKGVPREGYKVYKD--GELIGEVTSGTLSPLLGIGIGIAFVKPEYAVPGVEIEVEIRGKPKKAVTVAPPFYDPKKY 392
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CLOB1 (Aminomethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 232 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 594 +LR EA L LYGN+M++ +TP+E G+ + + E F+G + ++KQ EG + VGF G P + + D G IG +T+G SP L K I + V+ K GT+ I+VR K Sbjct: 233 TLRFEASLLLYGNEMDETITPLEVGM--GFFAKLKIEEDFIGKDALIKQKAEGVTRKLVGFELLDKGIPRHGYEVIKD--GKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKK 351
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PELLD (Aminomethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 190 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPT 594 +LRLE G LYG++++Q P+EA L W + + +G F+G E L Q++ P GF G R K+ + IG + SG SP L++ + + K GT+V +E+RG G I +PFV T Sbjct: 231 TLRLEMGYSLYGHEIDQDTNPLEARLKWVV---KLDKGHFIGREACL-QVELNPKRSVAGFVLEGRALPRQGCKLFNSDHQEIGRVCSGTLSPTLQEPVGTCSLLREYQKPGTRVFVEIRGTMQPGTIRPLPFVKT 362
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CORJK (Aminomethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA-GGPPARSHSKVHDEQG-NPIGEITSGGFSPCLKKNIAMGY-----VKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYGN++ +TPV+AGL I +++ F+G + I+ ++G +G G AR +V G IG +TSG SP L +A+ Y V SG G V++++RGK ++ + +PF Sbjct: 248 TLRLEAGMPLYGNELSLKLTPVDAGL--GILAATKSKDSFVGRDAIVSAKEKGTQQVLIGLAGEGRRAARGGYEVFAGDGEKAIGAVTSGALSPTLGHPVALAYVAKSAVSSGAAAEGATVEVDIRGKRFEYKVVALPF 384
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BURCJ (Aminomethyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM+ V+P++AGL W + A F+G + + G +++ AGG R+H KV G GEITSG FSP ++++IA V + + + G V++++R K + K+PFV Sbjct: 234 TLRLEAGMNLYGQDMDDTVSPLDAGLAWTVD--LAAPRDFVGRAALEANGTRAAFVGLILQKENGKAGG-VLRAHQKVVTPHGE--GEITSGTFSPSMQESIAFARVPAAV-QIGDTVQVQIRDKNLPARVVKLPFV 364 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |