CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_STRM5 (Aminomethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ ++P EA L W + + F+G + + Q G + +G H + G GEI SG FSP L K IA V +G + G +V +++RG+ + K PFV Sbjct: 231 TLRLEAGMNLYGQDMDEAISPYEAALAWTVSLDEGRD--FIGRDVLEAQKAAGNARQMIGLVMDEKGVLRHGQAVTTAGGQ-GEILSGTFSPTLAKGIAFARVPAG--ELG-QVTVDIRGRQVPVRVVKFPFV 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PYRFU (Probable aminomethyltransferase OS=Pyrococcus furiosus GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = -2 Query: 181 SLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 594 +LRLEAG LYGND ++ VTP++A L +AI + F+G + +LKQ ++G + V F R KV+ G IGE+TSG SP L I + +VK K G +++I++RG PF K Y Sbjct: 250 TLRLEAGYTLYGNDTKELQLLSTDIDEVTPLQANLEFAI----YWDKDFIGKDALLKQKEKGLGRKLVHFKMLEKSVPREGYKVY-ANGELIGEVTSGTLSPLLNIGIGIAFVKEEYAKPGVEIEIDIRGTRKKAITVTPPFYDPKKY 392
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_NATPD (Probable aminomethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 45/135 (33.33%), Postives = 66/135 (48.89%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHV---TPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG L GN+ + TP EA + +A+ F+G++ + Q + GP R VG H G+ +GE+TSG SP L IA+GYV + GT++ + VRG D + +PF Sbjct: 226 TLRLEAGFLLGGNEFDPETNPRTPYEANIGFAVDLGTE----FVGSDALAAQREAGPDERLVGLRLQDRGIARHGHDIVAAGDVVGEVTSGTMSPTLGAAIALGYVPVEYTEPGTELAVVVRGDEKDAVVEALPF 356
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LISIN (Aminomethyltransferase OS=Listeria innocua GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG--FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA L LYG ++ + +TP+EAGL +A+ ++ A+ F+G + ++KQ + G + VG G P + +++ IG ITSG SP L NI + + + + ++++ +R K + + PF Sbjct: 228 TLRLEAVLALYGQELSKDITPLEAGLNFAVKLKKEAD--FIGKQALIKQKEAGLTRKLVGIELIERGIPRHDYPVFLNDK--EIGVITSGTQSPTLGTNIGLALIDTAYTELDQELEVGIRNKKVKAKVVQTPF 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BORPD (Aminomethyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ P +AGLTW + + E F+G + L+Q P VG R+H V+ G GEITSG SP L ++A V G+ + G V++++RGK + K+PFV Sbjct: 231 TLRLEAGMNLYGQDMDELTQPDQAGLTWTV-SLKDPERRFVGRD-ALEQF--AAPRGFVGLKLQERGVMRAHMAVYTPLGE--GEITSGTMSPTLGVSVAFARVPQGV-QPGQTVEVDIRGKRVPALVCKLPFV 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BORPA (Aminomethyltransferase OS=Bordetella parapertussis GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V P +AGL+W + + A F+G + I + + G ++ G R+H V QG +GE+TSG SP L ++ V G+ + G V++E+RGK + K+PFV Sbjct: 231 TLRLEAGMNLYGQDMDELVHPDQAGLSWTVALKDEAR-RFVGRDAIEQFAVPRAFVGLKLQERGVM------RAHMPVRCAQG--MGELTSGTMSPTLGVSVGFARVPVGV-QPGDAVEVEIRGKWVPALVCKLPFV 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BORBR (Aminomethyltransferase OS=Bordetella bronchiseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V P +AGL+W + + A F+G + I + + G ++ G R+H V QG +GE+TSG SP L ++ V G+ + G V++E+RGK + K+PFV Sbjct: 231 TLRLEAGMNLYGQDMDELVHPDQAGLSWTVALKDEAR-RFVGRDAIEQFAVPRAFVGLKLQERGVM------RAHMPVRCAQG--MGELTSGTMSPTLGVSVGFARVPVGV-QPGDAVEVEIRGKWVPALVCKLPFV 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACHD (Aminomethyltransferase OS=Bacillus halodurans GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 43/134 (32.09%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG ++ + ++P+EAG+ +A+ + F+G E + KQ ++G P + VG G P + D Q IG +T+G SP LKKN+ + +++ + GT+V + VR + + PF Sbjct: 232 TLRFEAKLPLYGQELTKDISPIEAGIGFAVKVDKE---DFIGKEILKKQKEQGAPRKLVGLEMVDKGIPRTGYEVYVDNQ--KIGFVTTGTQSPTLKKNVGLALLQAEHSELGTEVIVHVRKRQLIAKVVATPF 360
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_XYLFM (Aminomethyltransferase OS=Xylella fastidiosa (strain M12) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = -2 Query: 172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-SKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594 +LRLEAG+ LYG DM++ V+P EA L W + EG F+G + +Q G + +G H KV QG G I SG FSP L K I V +G ++V++ +R +A + K PFV +P+ Sbjct: 231 TLRLEAGMNLYGQDMDEQVSPYEAALGWTV---MLDEGRNFIGRNVLEQQKTNGVSRQMIGLLMDEKGVLRHGQKVLTAQGE--GHILSGTFSPTLNKAIGFARVPAG---KPSEVRVNIRDRAIPVRVVKFPFVREGQTQPN 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROAC (Aminomethyltransferase OS=Propionibacterium acnes GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYG+++ + P +AGL + ++ EG F+G L+ D VG G A + +G ITSG SP L IAM +V + K GT + ++VRGKA + + ++PF Sbjct: 239 TLRLEAGMPLYGHELGTDIHPSQAGLGRVVNFKK--EGDFVG-RCALENRDTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKIGTSLSVDVRGKALNTTVVELPF 367 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |