CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18 Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 229 TLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18 Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 229 TLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = -2 Query: 193 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 594 +LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 234 TLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = -2 Query: 193 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 594 +LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 234 TLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CYAP8 (Aminomethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-18 Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA +CLY D++ + TP+EAGL W + ++G F+G + + KQ +G R VG G H +G +GE+TSG P + K IA+ YV L K GT +++E+RG+ + K PF Sbjct: 233 TLRLEAAMCLYSQDIDDNTTPLEAGLNWLV--HLDSKGDFIGRDILEKQKAQGVERRLVGLQMEGRHIARHGYPVLYEGKIVGEVTSGTLPPTVGKAIALAYVPRSLGKVGTPLEVEIRGQNCQAIVVKKPF 362
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG DM P EAGL W + A+ F+G + + + + GP R VG G H G P+G +TSG +SP L++ IA+ + + L K GT + +E+RGKA + + PF Sbjct: 232 TLRLEAAMHLYGQDMNADTNPFEAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACTN (Aminomethyltransferase OS=Bacteroides thetaiotaomicron GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 55/135 (40.74%), Postives = 74/135 (54.81%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG-FLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND++ +P+EAGL W + EG F+ + KQ EG + VGF G P + V++E G IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 229 TLRLEMGFCLYGNDLDDKTSPIEAGLGWIT---KFVEGKEFINRPMLEKQKSEGTTRKLVGFEMIDRGIPRHGYELVNEE-GEGIGVVTSGTMSPTRKIGIGMGYVKPEYAKVGTEICIDMRGRKLKAIVVKPPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACA2 (Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG ++ + +TP+EAG+ +A+ + + + F G + +Q ++G P + VG H + G PIGE+T+G SP LKKNI + +K+ + GT+V++E+R K I + PF Sbjct: 230 TLRFEAKLALYGQELTKDITPIEAGIGFAV--KHKKDSDFFGKSVLREQKEKGAPRKLVGLEMIEKGIPRHGYAVKKDGVPIGEVTTGTQSPTLKKNIGLALIKTEFSEVGTEVEVEIRKKTVKAKIVRTPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNR3 (Aminomethyltransferase OS=Synechococcus sp. (strain RCC307) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 SLRLEA + LYGNDM+ + +P+E GL W + E F+G E + +Q EG + VG G H G P+G +TSG FSP L+ +A+ V++ L K G ++ +E+RG+ + K PF Sbjct: 225 SLRLEAAMHLYGNDMDANTSPLECGLGWLVHLEMPIE--FVGREALERQTAEGVSRKLVGLQLQGRAIARHDYPVLHNGEPVGVVTSGTFSPTLEHPVALASVRADLAKLGNELMVEIRGRQEPAVVVKRPF 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNY3 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 52/132 (39.39%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYG DM TP+EAGL W + ++G F+G + +Q G R VG H G +G +TSG SP L+K IA+GYV + L K G ++++EVRGK Y + K F Sbjct: 235 TLRLEAGMGLYGQDMNDETTPLEAGLGWLV--HLDSKGDFIGRAVLTEQKANGVEKRLVGLEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPTELAKVGQELEVEVRGKTYGIKVVKKLF 364 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |