CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNPX (Aminomethyltransferase OS=Synechococcus sp. (strain WH8102) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG DM TP EAGL W + + F+G + + + + GP R VG G H G +G +TSG +SP L++ IA+ YV + L K G ++ +E+RGKA + K PF Sbjct: 234 TLRLEAAMHLYGMDMNAETTPFEAGLGWLVHLEMPVD--FVGRQALEQAAESGPTKRLVGLKLQGRAIARHDYPVLHNGETVGVVTSGTWSPTLEEPIALAYVPTALAKLGAELSVEIRGKAQPACVVKRPF 363
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_ANASP (Aminomethyltransferase OS=Anabaena sp. (strain PCC 7120) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG D++ + TP+EAGL W + +G F+G + +Q G R +G G H G +G +TSG SP L +A+ YV S L K G +++E+RGKAY + K PF Sbjct: 240 TLRLEAAMALYGQDIDDNTTPLEAGLGWLV--HLDTKGDFIGRSVLEQQKATGVQRRLIGLQTQGRNIARHGYQVLSDGKVVGGVTSGTLSPTLGYPVALAYVPSKLAKVGQPLEVEIRGKAYPAVVVKRPF 369
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_NEIMA (Aminomethyltransferase OS=Neisseria meningitidis serogroup A GN=gcvT PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.982e-17 Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LR+EAG+ LYGNDM+ +P+EAG+ W + + + F+G +L ++G V++VG G G R+H +V ++G GE TSG FSP LK++IA+ V G K+ +RGK D + K+PFV Sbjct: 230 TLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGK--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLIRGKEADVRVLKLPFV 358
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_GEOKA (Aminomethyltransferase OS=Geobacillus kaustophilus GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.380e-17 Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG ++ ++PVEAGL +A+ + E F+G + +Q +EGPP R VG H + G +G +T+G SP LKKNI + VK+ + G +V++++RGK NI +PF Sbjct: 230 TLRFEACLPLYGQELSDSISPVEAGLGFAV--KTEKETPFIGQAVLKRQKEEGPPRRLVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVAAIGREVEVDIRGKRLKANIVPIPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNP2 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17 Identity = 51/132 (38.64%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAGL LYG DM+ TP+EAGL W I + + F+ + + Q G R VG G H G +G +TSG SP L+K IA+ Y+ K G V +E+RGK Y + K PF Sbjct: 228 TLRLEAGLHLYGQDMDDDTTPLEAGLGWLIHWQEK--DAFIAKDILQTQKAAGVQRRLVGLEMQGRGIARHDYSVLVNGEAVGLVTSGTMSPTLEKAIALAYLPLEFSKVGQAVTVEIRGKQYPAQVVKKPF 357
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNPW (Aminomethyltransferase OS=Synechococcus sp. (strain WH7803) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16 Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG DM+ TP EAGL W + F G + + D GP R VG G H G G ITSG +SP L++ IA+ YV + L K G ++ +E+RG+ + + PF Sbjct: 236 TLRLEAAMHLYGQDMDADTTPFEAGLGWLV--HLEMPSTFTGRAALERAADSGPSRRLVGLKLKGRAIARHGYPVIHNGEQAGAITSGSWSPTLQEAIALAYVPTALAKVGQELGVEIRGQVQAATVVRRPF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THISH (Aminomethyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V+P+E+GL W + AE F+G + KQ G R VG G R H +V GEITSGGFSP L +IA+ V +G G +V+++VRGK + K PFV Sbjct: 226 TLRLEAGMNLYGQDMDEQVSPLESGLAWTVA-FEPAERDFVGRAALEKQKAAGGLRRFVGLVLEGRGVLRGHMRVLCGAAGE-GEITSGGFSPTLGVSIALARVPAG---TGERVEVDVRGKPQPARLVKPPFV 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_SYNS3 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9311) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYG DM+ TP EAGL W + A F+G + + + ++GP R VG G H G +G +TSG +SP L++ IA+ + L K GT++ +E+RG+ + K PF Sbjct: 236 TLRLEAAMHLYGQDMDAATTPFEAGLGWLVHLEMPAL--FIGRQALEQAAEQGPSKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTELSVEIRGQLQPATVVKRPF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_NEIMB (Aminomethyltransferase OS=Neisseria meningitidis serogroup B GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.191e-16 Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG-FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LR+EAG+ LYGNDM+ +P+EAG+ W + + + F+G +L ++G V++VG G R+H +V ++G GE TSG FSP LK++IA+ V G K+ +RGK D + K+PFV Sbjct: 230 TLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGQ--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLMRGKEVDVRVLKLPFV 358
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEPBL (Aminomethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16 Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = -2 Query: 193 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 594 +LR+EA LYG+++ TP+E+G+ W + +++ + + KIL Q G + V F AG P R + +V D QGN IG+ TSG FSP LKK I + +++ K G ++IE+R + IT PF+P Sbjct: 234 TLRIEAKYPLYGHELNNQWTPIESGIGWIVKEKKNP---YFSSGKILSQKKNGTEFKIVAFALTEAGVP--RENFRVLDFQGNEIGKTTSGTFSPSLKKGIGLASIRTEKIKDGEPIQIEIREQPKQAIITTKPFIP 365 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |