CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEPBJ (Aminomethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16 Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = -2 Query: 193 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 594 +LR+EA LYG+++ TP+E+G+ W + +++ + + KIL Q G + V F AG P R + +V D QGN IG+ TSG FSP LKK I + +++ K G ++IE+R + IT PF+P Sbjct: 234 TLRIEAKYPLYGHELNNQWTPIESGIGWIVKEKKNP---YFSSGKILSQKKNGTEFKIVAFALTEAGVP--RENFRVLDFQGNEIGKTTSGTFSPSLKKGIGLASIRTEKIKDGEPIQIEIREQPKQAIITTKPFIP 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16 Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAGL LYGNDM++ +TP EA + W + R F+G + +L Q + G + G R+H KV G GEITSG FSP L K+IA+ + +G A KV +E+R K + K PFV Sbjct: 224 TLRLEAGLNLYGNDMDESITPWEANMGWTVMLNDRE---FIGRQPLLNQKENGHSEQVGLILEGKGVLRAHQKVLMPNGEE-GEITSGTFSPTLGKSIALARLPAG---ATGKVDVEIRNKRQVAQVVKPPFV 349
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACFR (Aminomethyltransferase OS=Bacteroides fragilis GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND++ +P+EAGL W + +G F + KQ EG + VGF G P + ++ +G+ IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 229 TLRLEMGFCLYGNDLDDTTSPIEAGLGWIT---KFVDGKNFTNRSMLEKQKAEGTVRKLVGFEMIDRGIPRHGY-ELTTAEGDKIGVVTSGTMSPIRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACFN (Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND++ +P+EAGL W + +G F + KQ EG + VGF G P + ++ +G+ IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 229 TLRLEMGFCLYGNDLDDTTSPIEAGLGWIT---KFVDGKNFTNRSMLEKQKAEGTVRKLVGFEMIDRGIPRHGY-ELTTAEGDKIGVVTSGTMSPIRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16 Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EAGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + D Q IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 233 TLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRADNQ--KIGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THETN (Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.375e-16 Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EAGL LYGN++ + +TP+EAGL + + + +G F+G + +LKQ ++G + VGF G H IG +T+G FSP LKKNI + + S + G ++++ +R K I F Y K Sbjct: 239 TLRFEAGLPLYGNELGEDITPLEAGLGFFV---KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIPRHGYEVQADNQKIGYVTTGYFSPTLKKNIGLALIDSKYAQIGNQIEVIIRNKPLKAVIVDKNFYKKNYKK 374
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROMA (Aminomethyltransferase OS=Prochlorococcus marinus GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.375e-16 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYGND+ TP EAGL W + E F+G ++KQ +EG + V G + +GEITSG +SP L + IA+ Y+ L K GT V +++R K + + K PF Sbjct: 239 TLRLEAGMPLYGNDINNTTTPFEAGLGWLVHLETPDE--FIGKAALVKQTNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPIDLTKIGTAVSVQIRDKLHTAIVAKKPF 368
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EAGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + + H+++ IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 233 TLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRAHNQK---IGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROM1 (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEA + LYGND+ TP EAGL W + F+G + + KQ + G + VG G + + +++ + +G +TSG +SP L+K IA+ YV S + K T++++E+RGK + I K PF Sbjct: 238 TLRLEASMHLYGNDINLDTTPFEAGLGWLV--HLEMPNDFIGRKALEKQAEVGTQKKLVGIQVLDKGIARKGYPVLYNSE--TVGIVTSGTWSPTLQKPIALAYVPSEIAKVNTQIEVEIRGKKHPAIIVKRPF 367
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CARHZ (Aminomethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG+++ +TP+EAGL WA+ + F+G E +L Q + G + VG G P + + V +++G +G +TSG F+P LKKN+AM V + GT+V + +RGK + PF Sbjct: 227 TLRFEACLPLYGHELSAEITPLEAGLGWAVKFNKE---DFIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIVFNQRG--VGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKGVRARVISRPF 355 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |