CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACV8 (Aminomethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 52/135 (38.52%), Postives = 71/135 (52.59%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLE G CLYGND+ +P+EAGL W + EG F + KQ EG + + F G P + V+ + G IGE+TSG SP K I MGYV++ GT++ I+VRG+ + K PF Sbjct: 229 TLRLEMGFCLYGNDLSDTTSPLEAGLGWIT---KFVEGKNFTSRALLEKQKAEGLKRKLIAFEMVDRGIPRHGYELVNAD-GEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRGRKLKAVVVKAPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THET8 (Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 187 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 594 SLRLEAG LYG+++ + P+ W + K E FLG E +L Q R VG GG P + + G P+G +TSGG+SP L++ IA+ YV+ G A ++EVRG+A ++ +PFVP K Sbjct: 225 SLRLEAGFPLYGHELTEETNPLCTPWAWVVKK----EKAFLGKEAMLAQACRE---RLVGLVLEGGIPREGYRVLSG--GRPVGRVTSGGYSPLLQRGIALAYVEEG---AEGPFQVEVRGRAVPAALSPLPFVPLK 349
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROA2 (Aminomethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLE G LYG+++ + +P+EA L W R +G F+G E + +D P VGF R V++ P+G + SG SP LK+ I V G K+GT + +EVRGK Y G + K+PFV Sbjct: 231 TLRLEMGYPLYGHEINRETSPIEARLKWVT---RLDKGNFVGRESCVA-VDINPQRTVVGFMMHERAIPRQGFTVYNRDRKPLGSVCSGTMSPTLKQPIGTADVPRGYMKSGTPLYLEVRGKFYKGEVVKLPFV 360
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_GEOSW (Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG ++ + +TP+EAGL +A+ + A+ F+G + + KQ +EG + VG H G IG +T+G SP LKKNI + +K+ + T+V++E+RGK + PF Sbjct: 230 TLRFEATLPLYGQELSKDITPIEAGLGFAVKTNKDAD--FIGKDVLKKQKEEGTARKLVGIEMIDKGIPRHGYKVFANGEEIGFVTTGTQSPTLKKNIGLALIKTEFTEMDTEVEVEIRGKRLKAKVIATPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CORA7 (Aminomethyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 51/135 (37.78%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV--KSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 SLRLEAG+ LYGN++ + +TPVEAG++ A K+ E F+GAE + ++ +EGP G + AR+ S+V+ + N +G +TSG SP L +A+ + +GL + G V++++RGK Y ++ +PF Sbjct: 236 SLRLEAGMPLYGNELTRDITPVEAGMSRAFAKK---EQDFVGAEVLRQRAEEGPQAVITGLVSSQRRAARAGSEVYVGE-NKVGTVTSGQPSPTLGHPVALALIDTAAGL-EPGAAVEVDIRGKRYPFEVSALPF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_NITEU (Aminomethyltransferase OS=Nitrosomonas europaea GN=gcvT PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRR--VGF-FAGGPPARSHSKVHDEQGNPI--GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V P+E+GL W + ++E F G + +L+ PV R VG R+H KV Q GEITSGGFSP L ++IA+ + +G+ AG +V + VR K + K PFV Sbjct: 227 TLRLEAGMNLYGQDMDETVNPLESGLAWTVD--LKSERDFTGKQTLLE-----TPVNRQLVGLVLLDKGVLRNHQKVITRQEGEAGEGEITSGGFSPTLNQSIALARIPAGI-AAGEQVHVVVRDKQLAAKVVKYPFV 356
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEGPL (Aminomethyltransferase OS=Legionella pneumophila (strain Lens) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15 Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ TP+E+GLTW + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 226 TLRLEAGMLLYGQDMDETTTPLESGLTWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_DESHY (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EA L LYGN++ +TP+EAGL + + + + F+G E + Q ++G P + VG ARSH + E G IG ITSG FSP L KNIA+G + + G + + +RGKA K +P+ +YK Sbjct: 232 TLRFEARLPLYGNELGPDITPLEAGLGFFV---KLEKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKE-GKEIGFITSGSFSPTLNKNIALGLIPPEYAQIGETLDVIIRGKA-----VKARIIPSLFYK 362
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_DESHD (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EA L LYGN++ +TP+EAGL + + + + F+G E + Q ++G P + VG ARSH + E G IG ITSG FSP L KNIA+G + + G + + +RGKA K +P+ +YK Sbjct: 232 TLRFEARLPLYGNELGPDITPLEAGLGFFV---KLEKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKE-GKEIGFITSGSFSPTLNKNIALGLIPPEYAQIGETLDVIIRGKA-----VKARIIPSLFYK 362
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_THET2 (Aminomethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 187 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 594 SLRLEAG LYG+++ + P+ W + K E FLG E +L Q R VG GG P + + G P+G +TSGG+SP L++ IA+ YV+ G A ++EVRG+A ++ +PFVP K Sbjct: 225 SLRLEAGFPLYGHELTEETNPLCTPWAWVVKK----EKAFLGKEAMLAQACRE---RLVGLVLEGGIPREGYRVLSG--GCPVGRVTSGGYSPLLQRGIALAYVEEG---AEGPFQVEVRGRAVPAALSPLPFVPLK 349 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |