CN189292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_DECAR (Aminomethyltransferase OS=Dechloromonas aromatica (strain RCB) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYG DM++ V+P++AGL W + + F+G ++ + + + G R H KV +QG+ GEITSG FSP L+++IA+ + G+ + G +V++++RGKA +TK F Sbjct: 231 TLRLEAGMNLYGQDMDETVSPLDAGLAWTVS--LNTDRDFVGKAALVTNGQQKQFLGLILLDKG--VLRGHQKVMTKQGD--GEITSGSFSPTLQQSIALARLPLGV-QIGDEVEVDIRGKALKAKVTKPVF 355
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM+ V+P++AGL W + E F+G K+ KQ G + + A G R+H KV G GEITSG FSP ++++IA V G+ + G V +++R KA ++ K+PFV Sbjct: 234 TLRLEAGMNLYGQDMDDDVSPLDAGLAWTVDLSAPRE--FIGRAKLEADGSKQSFVGLILHKDNGKAAG-VLRAHQKVVTPNGE--GEITSGTFSPTMQESIAFARVPKGV-QPGDVVHVQIRDKALPASVVKLPFV 364
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_LEGPA (Aminomethyltransferase OS=Legionella pneumophila (strain Paris) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G + Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 226 TLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALASQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LR EA L LYG+++ ++P+ AGL W + K + E F+G E +LKQ + G + VG G P + ++ ++G +G ITSG F+P L KN+ +GYV+ G ++ I VR K I K PF Sbjct: 231 TLRFEACLALYGHELTDDISPLMAGLGWTV-KFNKPE--FVGKEPLLKQKEAGTTYQLVGLEMIDRGIPRQGYAIF--KEGQEVGWITSGTFAPTLGKNMGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPF 359
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_RALPJ (Aminomethyltransferase OS=Ralstonia pickettii (strain 12J) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++HV+P++AGL W + ++E F G + G + VG G R+H KV G+ GEITSG FSP L +IA+ + + GT V++E+R + + K+PFV Sbjct: 241 TLRLEAGMNLYGQDMDEHVSPLDAGLAWTVD--LQSERDFTGKAALQA---GGQREQFVGLILRDKGGVLRAHQKVITAAGD--GEITSGTFSPSLSLSIALARLPKEV-PVGTDVQVEIRDRKLTATVVKLPFV 367
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_PROMP (Aminomethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = -2 Query: 199 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 594 +LRLEAG+ LYG D+ + TP EAGL W + + F G E + KQ G + VG G + G IG ITSG +SP +K IA Y+++ V+I +RGK + G ITK F Sbjct: 236 TLRLEAGMHLYGQDLNETTTPYEAGLGWLVHLENNHD--FFGREFLEKQSRFGINKKLVGLNIEGRAIGRKGCEVFKDGENIGTITSGSWSPTKQKAIAFAYIQNSYATLNNVVEILIRGKTFKGTITKRAF 365
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BURA4 (Aminomethyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 49/139 (35.25%), Postives = 75/139 (53.96%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF------AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++ V+P++AGL W + A F+G + + + +G VG G R+H KV G GEITSG FSP ++++IA V + +H G + +++R K + K+PFV Sbjct: 234 TLRLEAGMNLYGQDMDETVSPLDAGLAWTVD--LSAPRDFVGRDALER---DGTRAAFVGLILQKENGKAGGVLRAHQKVVTPHGE--GEITSGTFSPSMQESIAFARVPAAVH-VGDTIHVQIRDKQLPARVVKLPFV 364
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_GEOTN (Aminomethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 178 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 594 +LR EA L LYG ++ ++P+EAGL +A+ + E F+G + +Q + GPP R VG H G G +T+G SP LKKNI + VK+ + G +V++++RGK K VPT +YK Sbjct: 230 TLRFEACLPLYGQELSATISPLEAGLGFAV--KTEKEPPFIGQAVLKQQKEAGPPRRLVGIEMIDKGIPRHGYRVFAAGEEAGFVTTGTQSPTLKKNIGLALVKAEVAAIGQEVEVDIRGKR-----LKATIVPTPFYK 361
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_CHRVO (Aminomethyltransferase OS=Chromobacterium violaceum GN=gcvT PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 54/134 (40.30%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG+DM++ V+P+EAG+ W I AE F G E + Q G +++VG G R KV E G ITSG FSP LK +IA+ V + G ++++RG D + KMPFV Sbjct: 226 TLRLEAGMNLYGHDMDETVSPLEAGMGWTIA-WEPAERKFNGREALEAQKAAGVKMKQVGLVLEGRGVLREGLKVVVESVGE-GVITSGTFSPTLKHSIAIARVPAA---TGAAAQVDLRGTLTDVRVVKMPFV 354
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_RALSO (Aminomethyltransferase OS=Ralstonia solanacearum GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = -2 Query: 196 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 594 +LRLEAG+ LYG DM++HV+P++AGL W + ++E F G + G + VG G R+H KV G+ GEITSG FSP L ++IA+ + + G V++E+R + + K+PFV Sbjct: 241 TLRLEAGMNLYGQDMDEHVSPLDAGLAWTVD--LQSERDFNGKAALAA---NGQRDQFVGLLLRDKGGVLRAHQKVITAAGD--GEITSGTFSPSLSQSIALARLPKDV-AIGADVQVEIRDRRLTATVVKLPFV 367 The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bpback to top |