CN189292

Overview
NameCN189292
Unique NameCN189292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACC1 (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.018e-13
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TPVEAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPVEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACHK (Aminomethyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACCZ (Aminomethyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACCR (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACC4 (Aminomethyltransferase OS=Bacillus cereus (strain B4264) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACC3 (Aminomethyltransferase OS=Bacillus cereus (strain 03BB102) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACC2 (Aminomethyltransferase OS=Bacillus cereus (strain G9842) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACC0 (Aminomethyltransferase OS=Bacillus cereus (strain AH820) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACAN (Aminomethyltransferase OS=Bacillus anthracis GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
[Close]
BLAST of CN189292 vs. ExPASy Swiss-Prot
Match: GCST_BACAH (Aminomethyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=gcvT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = -2 
Query:  172 SLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 594
            +LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  232 TLRFEATLPLYGQELSKDITPIEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
The following BLAST results are available for this feature:
BLAST of CN189292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
GCST_BACC11.018e-1337.06Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACHK1.329e-1336.36Aminomethyltransferase OS=Bacillus thuringiensis s... [more]
GCST_BACCZ1.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACCR1.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACC41.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACC31.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACC21.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACC01.329e-1336.36Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACAN1.329e-1336.36Aminomethyltransferase OS=Bacillus anthracis GN=gc... [more]
GCST_BACAH1.329e-1336.36Aminomethyltransferase OS=Bacillus thuringiensis (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189292 ID=CN189292; Name=CN189292; organism=Citrus sinensis; type=EST; length=595bp
GAGGGCTTTAAAGTAAACACTTTTATTCAGGCAACAAGAATCATAAGAAT
TTGCAGAATTAAAGAACTGCTAGCAATAAAGACAGTAATCTCGAGCAGTC
AATGTTTATGAAACAAGTCAAAACAGGAATCGAGTAGAGCTTCCATAAGC
AGAACCAACAAAGATGTACTAAGACGGCTTGTAGTATTTTGTTGGCACAA
ATGGCATTTTAGTGATGTTTCCATCGTAGGCTTTTCCTCGAACCTCAATC
TTAACTTTTGTGCCTGCCTTGTGCAATCCAGATTTTACATATCCCATGGC
TATATTCTTCTTGAGGCAGGGGCTGAATCCTCCACTGGTAATTTCTCCAA
TGGGATTCCCTTGCTCATCGTGAACCTTACTGTGTGATCTGGCAGGCGGA
CCTCCAGCGAAGAATCCAACACGTCTGACTGGCGGACCTTCGTCAAGTTG
TTTGAGTATTTTCTCAGCACCTAGAAAGCCACCTTCTGCTCTCCTCCTCT
TTCCTATGGCCCATGTCAGTCCAGCTTCTACAGGTGTCACGTGTTGTTCC
ATGTCATTACCATATAAACATAAGCCAGCTTCAAGTCGGAGACTG
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