CN189291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_CANFA (Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.750e-32 Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 410 AGLCLYG+D+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+HS + + +G IG +TSG SPCLKKN+AMGYV S + GT + +EVR K ++KMPFV T YY Sbjct: 268 AGLCLYGSDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCPSPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYY 400
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.691e-32 Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 410 AGLCLYGND+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+ S + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K ++KMPFV T YY Sbjct: 262 AGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.365e-31 Identity = 68/133 (51.13%), Postives = 87/133 (65.41%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 410 AGLCLYGND+++H TPVE L+W +GKRRR F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++ +EVR K ++KMPFVPT YY Sbjct: 268 AGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYY 400
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_DICDI (Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum GN=gcvT PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.971e-31 Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 AGLCLYG+D+ +TP+EA L W I KRRR EGGF GA I KQL +G P +RVG G PAR + D N IG++TSG SP +++I+M YVK+ K GT+V + +RGK I+KMPFVPT Y K Sbjct: 267 AGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGTISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNYKK 402
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_YEAST (Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=GCV1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.370e-22 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRR----AEGGFLGAEKILKQLDEGPPVR-RVGF--FAGGPPARSHSKVH-DEQGNPIGEITSGGFSPCLKK-NIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 AG+CLYG+++++ +TPVEA L W I K RR + F G KI+ QL+ + RVGF GP AR+ K+ + +G +TSG SP L NI YV+ G HK GTK+ ++VR K Y + KMP VPT YYK Sbjct: 257 AGMCLYGHELDESITPVEAALNWVISKSRRDLVDQKYWFNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLNNINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYYK 399
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_HALOH (Aminomethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.952e-18 Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 395 G CLYGND++++ P+EAGL W + + + F+G +LK +EG + VGF G H + G+ IG +TSG SP L + I MGYV+ G + I VR +A G + K+PF+ Sbjct: 234 GYCLYGNDIDENTHPLEAGLGWTV---KFDKASFIGKRALLKYKEEGLSRKLVGFKLKGRGIPRHGYPIKDNGDQIGVVTSGSMSPTLSEGIGMGYVRYDKATPGESITIVVRNRAITGEVVKLPFI 357
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18 Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 419 A + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L++ IA+GY+ + L + G +V++E+RGK + + K PF Y +PS Sbjct: 243 AAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVEVEIRGKHHRATVVKRPF----YRRPS 372
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_THEM4 (Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.576e-18 Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A L LYGNDM++ +TP+E G+ WA+ + E F+G E + +QL+EG R GF H + G IG +TSG FSP L + I M ++ G +K+G ++IE+R K I KMPF Sbjct: 231 ASLLLYGNDMDETITPLEVGIKWAV----KFEKDFMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEKG-YKSGEIIEIEIRNKLVKAEIVKMPF 352
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17 Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 419 A + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L + IA+GY+ + L + G +V +E+RGK + + K PF Y +PS Sbjct: 243 AAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVAVEIRGKHHPATVVKRPF----YRRPS 372
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PARD8 (Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.263e-17 Identity = 52/128 (40.62%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND++ +P+EAGL W + AEG F ++ +Q EG + F H ++ D +GN IG +TSG SP LKK I MGYVK KAGT + I+VR K + K PF Sbjct: 235 GFCLYGNDLDDTTSPIEAGLGWIT---KFAEGKNFTNRAELERQKKEGVTRKLCAFELQEKGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQVVKAPF 359 The following BLAST results are available for this feature:
BLAST of CN189291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189291 ID=CN189291; Name=CN189291; organism=Citrus sinensis; type=EST; length=589bpback to top |