CN189291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.240e-16 Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 24 LYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 398 LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 243 LYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.240e-16 Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 24 LYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 398 LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 243 LYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 235 GFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 235 GFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_BACA2 (Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.609e-16 Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A L LYG ++ + +TP+EAG+ +A+ + + + F G + +Q ++G P + VG H + G PIGE+T+G SP LKKNI + +K+ + GT+V++E+R K I + PF Sbjct: 235 AKLALYGQELTKDITPIEAGIGFAV--KHKKDSDFFGKSVLREQKEKGAPRKLVGLEMIEKGIPRHGYAVKKDGVPIGEVTTGTQSPTLKKNIGLALIKTEFSEVGTEVEVEIRKKTVKAKIVRTPF 359
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_CYAP8 (Aminomethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.713e-16 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A +CLY D++ + TP+EAGL W + ++G F+G + + KQ +G R VG G H +G +GE+TSG P + K IA+ YV L K GT +++E+RG+ + K PF Sbjct: 238 AAMCLYSQDIDDNTTPLEAGLNWLV--HLDSKGDFIGRDILEKQKAQGVERRLVGLQMEGRHIARHGYPVLYEGKIVGEVTSGTLPPTVGKAIALAYVPRSLGKVGTPLEVEIRGQNCQAIVVKKPF 362
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_BACTN (Aminomethyltransferase OS=Bacteroides thetaiotaomicron GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16 Identity = 51/129 (39.53%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG-FLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND++ +P+EAGL W + EG F+ + KQ EG + VGF G P + V++E G IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 235 GFCLYGNDLDDKTSPIEAGLGWIT---KFVEGKEFINRPMLEKQKSEGTTRKLVGFEMIDRGIPRHGYELVNEE-GEGIGVVTSGTMSPTRKIGIGMGYVKPEYAKVGTEICIDMRGRKLKAIVVKPPF 359
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.050e-15 Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYG DM P EAGL W + A+ F+G + + + + GP R VG G H G P+G +TSG +SP L++ IA+ + + L K GT + +E+RGKA + + PF Sbjct: 237 AAMHLYGQDMNADTNPFEAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNY3 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.791e-15 Identity = 48/127 (37.80%), Postives = 66/127 (51.97%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 AG+ LYG DM TP+EAGL W + ++G F+G + +Q G R VG H G +G +TSG SP L+K IA+GYV + L K G ++++EVRGK Y + K F Sbjct: 240 AGMGLYGQDMNDETTPLEAGLGWLV--HLDSKGDFIGRAVLTEQKANGVEKRLVGLEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPTELAKVGQELEVEVRGKTYGIKVVKKLF 364
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNPX (Aminomethyltransferase OS=Synechococcus sp. (strain WH8102) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.791e-15 Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYG DM TP EAGL W + + F+G + + + + GP R VG G H G +G +TSG +SP L++ IA+ YV + L K G ++ +E+RGKA + K PF Sbjct: 239 AAMHLYGMDMNAETTPFEAGLGWLVHLEMPVD--FVGRQALEQAAESGPTKRLVGLKLQGRAIARHDYPVLHNGETVGVVTSGTWSPTLEEPIALAYVPTALAKLGAELSVEIRGKAQPACVVKRPF 363 The following BLAST results are available for this feature:
BLAST of CN189291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189291 ID=CN189291; Name=CN189291; organism=Citrus sinensis; type=EST; length=589bpback to top |