CN189291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.586e-14 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 AGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + D Q IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 238 AGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRADNQ--KIGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNS3 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9311) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.586e-14 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYG DM+ TP EAGL W + A F+G + + + ++GP R VG G H G +G +TSG +SP L++ IA+ + L K GT++ +E+RG+ + K PF Sbjct: 241 AAMHLYGQDMDAATTPFEAGLGWLVHLEMPAL--FIGRQALEQAAEQGPSKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTELSVEIRGQLQPATVVKRPF 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_THETN (Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.378e-14 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 AGL LYGN++ + +TP+EAGL + + + +G F+G + +LKQ ++G + VGF G H IG +T+G FSP LKKNI + + S + G ++++ +R K I F Y K Sbjct: 244 AGLPLYGNELGEDITPLEAGLGFFV---KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIPRHGYEVQADNQKIGYVTTGYFSPTLKKNIGLALIDSKYAQIGNQIEVIIRNKPLKAVIVDKNFYKKNYKK 374
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14 Identity = 47/137 (34.31%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 AGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + + H+++ IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 238 AGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRAHNQK---IGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_CARHZ (Aminomethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14 Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A L LYG+++ +TP+EAGL WA+ + F+G E +L Q + G + VG G P + + V +++G +G +TSG F+P LKKN+AM V + GT+V + +RGK + PF Sbjct: 232 ACLPLYGHELSAEITPLEAGLGWAVKFNKE---DFIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIVFNQRG--VGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKGVRARVISRPF 355
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_BACFR (Aminomethyltransferase OS=Bacteroides fragilis GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND++ +P+EAGL W + +G F + KQ EG + VGF G P + ++ +G+ IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 235 GFCLYGNDLDDTTSPIEAGLGWIT---KFVDGKNFTNRSMLEKQKAEGTVRKLVGFEMIDRGIPRHGY-ELTTAEGDKIGVVTSGTMSPIRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPF 359
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_BACFN (Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 G CLYGND++ +P+EAGL W + +G F + KQ EG + VGF G P + ++ +G+ IG +TSG SP K I MGYVK K GT++ I++RG+ + K PF Sbjct: 235 GFCLYGNDLDDTTSPIEAGLGWIT---KFVDGKNFTNRSMLEKQKAEGTVRKLVGFEMIDRGIPRHGY-ELTTAEGDKIGVVTSGTMSPIRKIGIGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPF 359
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14 Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 395 AGL LYGNDM++ +TP EA + W + R F+G + +L Q + G + G R+H KV G GEITSG FSP L K+IA+ + +G A KV +E+R K + K PFV Sbjct: 229 AGLNLYGNDMDESITPWEANMGWTVMLNDRE---FIGRQPLLNQKENGHSEQVGLILEGKGVLRAHQKVLMPNGEE-GEITSGTFSPTLGKSIALARLPAG---ATGKVDVEIRNKRQVAQVVKPPFV 349
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PROMA (Aminomethyltransferase OS=Prochlorococcus marinus GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.827e-14 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 AG+ LYGND+ TP EAGL W + E F+G ++KQ +EG + V G + +GEITSG +SP L + IA+ Y+ L K GT V +++R K + + K PF Sbjct: 244 AGMPLYGNDINNTTTPFEAGLGWLVHLETPDE--FIGKAALVKQTNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPIDLTKIGTAVSVQIRDKLHTAIVAKKPF 368
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PROM1 (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.283e-13 Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYGND+ TP EAGL W + F+G + + KQ + G + VG G + + +++ + +G +TSG +SP L+K IA+ YV S + K T++++E+RGK + I K PF Sbjct: 243 ASMHLYGNDINLDTTPFEAGLGWLV--HLEMPNDFIGRKALEKQAEVGTQKKLVGIQVLDKGIARKGYPVLYNSE--TVGIVTSGTWSPTLQKPIALAYVPSEIAKVNTQIEVEIRGKKHPAIIVKRPF 367 The following BLAST results are available for this feature:
BLAST of CN189291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189291 ID=CN189291; Name=CN189291; organism=Citrus sinensis; type=EST; length=589bpback to top |