CN189291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_NITOC (Aminomethyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.319e-13 Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP-ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 395 AG+CLYG DM++ TP+E+GL W + + E F+G + Q G P ++VG G R+ + G G +TSGGFSP L+++IA+ V G A ++++RG+A + K PFV Sbjct: 231 AGMCLYGADMDETTTPLESGLGWTVA-WKPPERDFIGRAVLEAQQAAGCPHQQVGLLLQGKGLMRNGQTITTNLGE--GVVTSGGFSPSLERSIALARVPVG---ADGPCEVQIRGRAVPAAMVKPPFV 353
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_CORA7 (Aminomethyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.319e-13 Identity = 46/130 (35.38%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV--KSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 AG+ LYGN++ + +TPVEAG++ A K+ E F+GAE + ++ +EGP G + AR+ S+V+ + N +G +TSG SP L +A+ + +GL + G V++++RGK Y ++ +PF Sbjct: 241 AGMPLYGNELTRDITPVEAGMSRAFAKK---EQDFVGAEVLRQRAEEGPQAVITGLVSSQRRAARAGSEVYVGE-NKVGTVTSGQPSPTLGHPVALALIDTAAGL-EPGAAVEVDIRGKRYPFEVSALPF 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNP6 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYG++++ P+EAGL W + R + FLG +++++ G R VG G H +G +TSG +SP L K IA+ YV L G ++ +E+RGK + K PF Sbjct: 241 AAMPLYGHELDTDTNPLEAGLGWVVHLDRNPD--FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVAIADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATVVKRPF 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_SYNE7 (Aminomethyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYG++++ P+EAGL W + R + FLG +++++ G R VG G H +G +TSG +SP L K IA+ YV L G ++ +E+RGK + K PF Sbjct: 241 AAMPLYGHELDTDTNPLEAGLGWVVHLDRNPD--FLGRDRLVQAKTNGLERRLVGLELPGRNIARHGYPVAIADTTVGIVTSGSWSPTLSKAIALAYVPPALANLGQELWVEIRGKQVPATVVKRPF 365
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A + LYGND+ TP EAGL W + F+G + + KQ + G + VG G + + +++ + +G +TSG +SP L+K IA+ YV S + K T++++E+R K + I K PF Sbjct: 243 ASMHLYGNDINLDTTPFEAGLGWLV--HLEMPNDFIGRKALEKQAEVGTQKKLVGIQVLDKGIARKGYPVLYNSE--TVGIVTSGTWSPTLQKPIALAYVPSEIAKVNTQIEVEIRRKKHPAIIVKRPF 367
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_HERA2 (Aminomethyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 3 Query: 15 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 413 GL LYG+++E+ + P EA L W + + +G F+G+E + GP VG G AR V G+ +G +T+G SP L KN+A VK+G K G +V + +R K + K PF +Y K Sbjct: 231 GLALYGHEIERDINPYEAKLGWVV---KLDKGPFIGSEALHDIKANGPVRTLVGLEMTGRGIARQGYPVVALDGSELGVVTTGMPSPSLGKNLAYALVKAGSLKIGAEVDVLIREKPVRATVVKTPFYKARYKK 361
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 392 A L LYG+++ ++P+ AGL W + K + E F+G E +LKQ + G + VG G P + ++ ++G +G ITSG F+P L KN+ +GYV+ G ++ I VR K I K PF Sbjct: 236 ACLALYGHELTDDISPLMAGLGWTV-KFNKPE--FVGKEPLLKQKEAGTTYQLVGLEMIDRGIPRQGYAIF--KEGQEVGWITSGTFAPTLGKNMGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPF 359
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG------GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 395 AG+ LYG DM+ H +P++AGL+W + ++E F+G +L + FAG G R+H KV G+ GEITSG FSP L ++IA + + GT+V++E+R + + K+PFV Sbjct: 246 AGMNLYGQDMDIHTSPLDAGLSWTVD--LQSERDFIGKSALLASGQQKT-------FAGLILRDKGGVLRAHQKVITPAGD--GEITSGTFSPSLSQSIAFARLPRDI-APGTEVQVEIRDRKLTATVVKLPFV 367
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_LEGPH (Aminomethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvT PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 395 AG+ LYG DM++ TP+E+GL W + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 231 AGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPM---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CN189291 vs. ExPASy Swiss-Prot
Match: GCST_THET2 (Aminomethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 3 Query: 12 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404 AG LYG+++ + P+ W + K E FLG E +L Q R VG GG P + + G P+G +TSGG+SP L++ IA+ YV+ G A ++EVRG+A ++ +PFVP K Sbjct: 230 AGFPLYGHELTEETNPLCTPWAWVVKK----EKAFLGKEAMLAQACRE---RLVGLVLEGGIPREGYRVLSG--GCPVGRVTSGGYSPLLQRGIALAYVEEG---AEGPFQVEVRGRAVPAALSPLPFVPLK 349 The following BLAST results are available for this feature:
BLAST of CN189291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189291 ID=CN189291; Name=CN189291; organism=Citrus sinensis; type=EST; length=589bpback to top |