CN189288

Overview
NameCN189288
Unique NameCN189288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 45/199 (22.61%), Postives = 94/199 (47.24%), Query Frame = 1
Query:   55 DMDILSCMLWVLFTWVLVITLNSFLRGCKAGSRKLPPGPTPYPVIGNL-LELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRAGKAIDIGQAAFNTTLNFLWNTIFSVDLADH 648
            ++ I S ++ ++ T+V  + +  + +      + LPPGP   P++G+L L  G  P  ++A ++K YGPV  ++ G+            +E ++  D +  +R      R   +D   + + P S     +RKIC S + + + + +   +R+  + +LL + Q +  AG+ +D+ +     T + +    F   + DH
Sbjct:    2 ELQISSAIIILVATFVASLLIKQWRKS--ESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIINDH 196          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 53/206 (25.73%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   79 LWVLFTWVLVITLNSFLRGCKA-GSRKLPPGPTPYPVIGNLLEL---GAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRAGKAIDIGQAAFNTTLNFLWNTIFSVDLADHSSDTAREFRDMV 684
            L ++ T+ + + L+  ++  K   S KLPPGP   P+IGNL +L    + P ++L KL + YGP+M L+ G+             E+++  D  F  R    A +   +    +A+ P       +RKIC   + + +++ +  H+R+   ++L+     +  AG  ID+    F+     L  T  S       +D   EF  +V
Sbjct:    6 LSIVITFFVFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSS--AGSPIDLSGKLFS-----LLGTTVSRAAFGKENDDQDEFMSLV 204          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 40/145 (27.59%), Postives = 67/145 (46.21%), Query Frame = 1
Query:   97 WVLVITLNSFLRGCKAGSRKLPPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLL 531
            +V ++ L+         ++KLPP P   P+IGNL +LG  PHRSL KLSK YGPVM L  G             R+I++  D  + NR          +    +++ P       +R I   H+ + +++ + +  R +    ++
Sbjct:    5 FVFILFLHKCFFTTSNNNKKLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMI 149          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 51/213 (23.94%), Postives = 92/213 (43.19%), Query Frame = 1
Query:   70 SCMLWVLFTWVLVITLNSFLRGCKAGSRKLPPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRA----GKAI----DIGQAAFNTTLNFLWNTIFSVDLADHSSDTAREFRDMV 684
            S +L V    VL+    + L   + G  +LPPGP P+PV+GNL ++     R   + ++ YGPV+S+ FG             +E+L+  D    +R    + +    +   + W         +RK+CN  +FT ++L+A + +R   +  ++        A    GK +     +   AFN      +   F ++      +  REF+ +V
Sbjct:    4 SLLLSVALAVVLIPLSLALLNRLRLG--RLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF-MNANGDIDEQGREFKTIV 213          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 40/171 (23.39%), Postives = 73/171 (42.69%), Query Frame = 1
Query:   88 LFTWVLVITLNSFLRGCKAGSRKLPPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRAGKAIDIGQAAFNTT 600
            L T + ++ L  FL         LPP P   PVIGNL +L   PHRSL  LS  YGP+M L FG+             ++++  D    NR     +    +    M + P       ++ +C  ++   +K+ + + +R + I +++   ++       +++ +     T
Sbjct:   10 LATILALLLLKQFLNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLT 180          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 45/188 (23.94%), Postives = 83/188 (44.15%), Query Frame = 1
Query:  139 KAGSRKLPPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNR---TVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRAGKAIDIGQAAFNTTLNFLWNTIFSVDLADHSSDTAREFRDMVWGI 693
            K   + LPP P   P+IG+L  +   PH+   KLS  +GP+M L  G             +E L+  + +F NR    V     A+   +F  A+ P       ++K+C S + + + +D    +R++  ++ ++       AG+A+D G      + N +     S   +++ +  A E + +V  I
Sbjct:   23 KQSKKNLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQKTSENDNQ-AEEMKKLVSNI 209          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:   64 ILSCMLWVLFTWVLVITLNSFLRGCKAGSRKL-PPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFS-MAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLL 531
            ++S  ++V  T +  ++L   LR   A  R+L PPGP   P IGNL +LG  PH+SL  LS  +GP+M L+ G             REI +N D+ F  R  P    A++    S +++ P       +RKI    + + +++ + + +R + ++ LL
Sbjct:    1 MISFTVFVFLTLLFTLSLVKQLRKPTAEKRRLLPPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGR--PSLYAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLL 156          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 1
Query:  106 VITLNSFLRGCKAGSRKLPPGPTPYPVIGNLLELG-AKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAH--QHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKL 486
            V +L S  +      +K PPGP   P+IGNLL L  ++PH +L  L+  +GPVM L+ GQ            +E+L+++DT+F +R  P  L A    +    M++ P       LRK+C S +  T K+
Sbjct:   10 VCSLISRRKPSPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASR--PSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKV 137          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 38/160 (23.75%), Postives = 76/160 (47.50%), Query Frame = 1
Query:  124 FLRGCKAGSRKLPPGPTPYPVIGNLLELGA-KPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQENCRAGKAIDIGQAAFNTT 600
            FLR     S +LPPGP   P+IGNL ++    P   L +LSK+YGP+ ++K G             +E+L+ QD +F  R +    +   +    + +   +     +RK+C  ++F+  ++ + + +R +  Q+++    +       +D+ +   + T
Sbjct:   18 FLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFT 177          
BLAST of CN189288 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 40/160 (25.00%), Postives = 75/160 (46.88%), Query Frame = 1
Query:   70 SCMLWVLFTWVLVITLNSFLRGCKAGSRKLPPGPTPYPVIGNLLELGAKPHRSLAKLSKIYGPVMSLKFGQXXXXXXXXXXXXREILQNQDTSFCNRTVPDALRAHQHDEFSMAWLPLSTPRTNLRKICNSHIFTTQKLDANQHLRRKRIQQLLAYAQEN 549
            S  + +L + ++ IT+  F +  +      P  P   P+IGNL +LG  PHRSL  LS  YGP+M L  G+            R+IL+  D  F +R          +D   +A+ P       ++ +C   + + + + + +++R++ I  ++   Q++
Sbjct:    3 SMTMIILQSLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKS 162          
The following BLAST results are available for this feature:
BLAST of CN189288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
C7D95_MENSP2.204e-1122.61Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71D8_SOYBN2.204e-1125.73Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A3_SOLME2.204e-1127.59Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C98A1_SORBI2.879e-1123.94Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71AE_ARATH2.879e-1123.39Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN3.760e-1123.94Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71A9_SOYBN6.413e-1130.38Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C99A1_SORBI8.376e-1133.85Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C83B1_ARATH8.376e-1123.75Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH8.376e-1125.00Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189288 ID=CN189288; Name=CN189288; organism=Citrus sinensis; type=EST; length=696bp
TTTAAAGAACGTGAAAGGCCACTGACTCTGGTGTTTCTTAGTGTTTCAAC
TGGAGATATGGATATCTTAAGCTGCATGTTATGGGTTTTATTCACATGGG
TTTTGGTCATAACTTTAAATTCCTTTTTAAGAGGTTGCAAAGCAGGATCG
AGAAAGCTTCCACCGGGACCGACGCCTTATCCTGTCATCGGAAACCTCCT
GGAGCTTGGAGCCAAACCTCACAGGTCACTAGCCAAGCTCTCCAAGATTT
ATGGCCCCGTAATGAGTCTAAAATTTGGCCAGGTAACCACAGTAGTCATT
TCTTCCGCAACTACAGCCAGAGAAATCCTTCAAAACCAAGATACGTCTTT
CTGTAATCGAACGGTCCCAGACGCACTCCGTGCACACCAGCACGATGAAT
TCTCGATGGCCTGGCTGCCACTCTCGACACCGCGGACAAATCTTCGAAAA
ATATGCAACTCACATATTTTCACCACTCAGAAACTCGATGCTAATCAACA
CCTCCGGCGCAAAAGAATCCAACAACTTCTTGCTTACGCTCAAGAAAATT
GCCGGGCCGGTAAAGCAATAGATATTGGCCAGGCAGCTTTCAATACTACT
CTTAATTTTTTATGGAACACAATTTTTTCCGTTGATTTGGCTGATCACAG
TTCAGATACTGCGCGAGAGTTTAGAGATATGGTTTGGGGTATTATG
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