CN189276

Overview
NameCN189276
Unique NameCN189276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:123..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 3
Query:    3 LATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LV 311
            +A +GG+ +V    NN E  +LARFA+  +NKK+N +L+F            G +Y ITL A++ G+KK++E K+W K W  FK++ EF  V    + T  ++
Sbjct:  190 IAKLGGITDVPFP-NNPEFQDLARFAIQVYNKKENVHLEFVENLNVKQQVVAGMMYYITLAAIDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSAKTGGII 291          

HSP 2 Score: 78.9518 bits (193), Expect = 2.004e-14
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 3
Query:    6 ATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 278
            A +GG+  V    NN E  +LARFAV ++NKK+N++L+F            G LY ITL A++ G+KK++EAK+W K W  FK++ EF  +
Sbjct:  474 AKLGGIINVPFP-NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEFKLI 563          

HSP 3 Score: 78.5666 bits (192), Expect = 2.617e-14
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 3
Query:    6 ATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LVV 314
            A +GG  +V    NN E  +LARFAV ++NKK+N++L++            G +Y ITL A + G+KK++EAK+W K W  FK++ EF  V    +    +++
Sbjct:  568 AIIGGFTDVPFP-NNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIII 669          

HSP 4 Score: 72.7886 bits (177), Expect = 1.436e-12
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 3
Query:   12 VGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 278
            +GG  EV    N+ E  +L RFAV ++NK QN++L+F            G LY IT  A +GG+KK++E K+W K W  FK++ EF  V
Sbjct:  382 LGGFTEVPFP-NSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLV 469          

HSP 5 Score: 69.3218 bits (168), Expect = 1.588e-11
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 3
Query:   45 NNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAV-EGGQKKLFEAKVWEKPWMQFKELKEFNTV 278
            NN +   LARFA+ ++NKKQN++L+F            G +Y ITL A  + G+KK+++AK+W K W  FK++ EF  V
Sbjct:  108 NNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLV 186          

HSP 6 Score: 68.9366 bits (167), Expect = 2.073e-11
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 3
Query:    6 ATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 278
            A  GG+  V    N+ E  +LARFAV ++N  QN++L+F            G +Y ITL A + G KK +EAK+W K W  FK++ +F  V
Sbjct:  285 AKTGGIINVPNP-NSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLV 374          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 3
Query:   54 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 302
            E  + ARFAV E+NK Q + L+F            GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   59 EAEDAARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 4.619e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 3
Query:   12 VGGVREVEATFNNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFKELKEF 269
            VGG+ +  A   N    V LARFAV EHN K N+ L+             G ++ +T+E  E GG  KL+EAKVWE+ W  FK+L++F
Sbjct:   56 VGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDF 143          
The following BLAST results are available for this feature:
BLAST of CN189276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTM_SOLTU1.534e-1436.89Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]
CYT3_ORYSJ9.944e-1444.58Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT2_ORYSJ4.619e-1142.05Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189276 ID=CN189276; Name=CN189276; organism=Citrus sinensis; type=EST; length=591bp
ATTTGGCTACAGTAGGCGGTGTTCGTGAGGTTGAAGCAACCTTCAACAAT
CAGGAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAA
GCAGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAG
TGGTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGT
CAGAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATT
CAAGGAGTTGAAAGAATTCAATACTGTGGCTCAGTCTCACTCCTCAACCG
CTTAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGAT
CAAACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAA
TATAAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTG
CAAGTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAGCGCAACTT
TTATAACTGTGTGAAAAATAATTGAAATGACCTTTGGTCTGTAATATATA
TACAAGATTAATCTCTTTCTACTTTAAAAAAAAAAAAAAAA
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