CN189273

Overview
NameCN189273
Unique NameCN189273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.126e-17
Identity = 58/162 (35.80%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFE 664
            F  F   Y K+Y    E + RF+ F + L+ I   NR   S    +NKFAD S  E      G   N    T    K      P  K     DWR+   V+ +K+Q  CG+CW F+T  S+E+ Y       I LSEQQ++DC   + + GC+GGL   AFE
Sbjct:   31 FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGL--NMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDC--DYVDMGCDGGLLHTAFE 188          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.126e-17
Identity = 62/164 (37.80%), Postives = 84/164 (51.22%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  F  R+ K Y S  E   RF  F  NL+ I + N+   S +  +NKF+D S +E      G +      T+   K+     P  K     DWR    V+ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I
Sbjct:   28 FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLS--LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAI 186          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.126e-17
Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            + + K Y S  +   R   + KNL  I + N +      +Y L +N   D + EE  +   G     S +   +   T +    +P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   31 KTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYGCGGGYMTTAFQYVQ 190          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17
Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLN-KFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPE---TKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            +  F +R+GK +    E   RF  F +N+      N +       ++ KFAD + +EF +  L    +  A    NHK      D  P    + DWR+ G V+PVK+QG CGSCW FS  G++E  +  +    +SLSEQ LV C     ++GCNGGL  QA  +I
Sbjct:   42 YGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNP--DYYARHLKNHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNI--DEGCNGGLMDQAMNWI 203          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  434 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            D LP++ DWRE+G V PVK+QG CGSCW FST  ++E       G  ISLSEQQLVDC  A  N GC GG  + AF++I
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFI 77          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 2
Query:  182 HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLN-KFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            +A+ F  +A    K + +VE ++ R A F+ N   +   N+KG S++L ++  FA  + EE++            T + N K+T   +  PE+ DWR  G V+P++DQ  CGSC+TF +  +LE       G     + LSE+ LV C +   N GCNGGL S  ++YI
Sbjct:    5 NAIDFNTWAANNNKHFTAVEALRRR-AIFNMNARFVAEFNKKG-SFKLSVDGPFAAMTNEEYR-----TLLKSKRTVEENGKVTYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYI 166          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 61/167 (36.53%), Postives = 79/167 (47.31%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GLSYRLGLNKFADWSWEEFQRHRLGAA-----QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  F   Y K Y S  E   R++ F  NL  I + N     G +    +NKF+D S  E      G +      N   T   N     D  P   DWRE   V+ +K+QG CG+CW F+T  S+E+ +     + I LSEQQL+DC     + GCNGGL   AFE I
Sbjct:   56 FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQP--PDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSV--DMGCNGGLLHTAFEEI 218          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.508e-17
Identity = 62/164 (37.80%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK-----DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  F  R+ K Y S  E   RF  F  NL+ I   N+   S +  +NKF+D S +E      G +      T+   K+     P  K     DWR    V+ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I
Sbjct:   28 FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLS--LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAI 186          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17
Identity = 60/184 (32.61%), Postives = 85/184 (46.20%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS-YRLGLNKFADWSWEEFQR----------------HRLGAAQNCSATTKGNHKLTAD-------VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            F  F  +Y + + + +E   R  TF  N   +    +KG   Y  G+N+F+D +  EF +                + L    N +        L  D       +  E  DWR S  V+ VKDQ +CG CW FST GS+E  Y   F K   LS Q+L+DC  +F+N GC GGL   A+EY++
Sbjct:  125 FEEFNSKYNRRHATQQERLNRLVTFRSNY--LEVKEQKGDEPYVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGENLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDC-DSFSN-GCQGGLLESAYEYVR 304          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17
Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  236 VEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL---------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            V+E+  R   + KNL  I   N +      +Y L +N   D + EE  +   G     S      H  + D L         P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++
Sbjct:   41 VDEISRRLI-WEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS------HSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQ 190          
The following BLAST results are available for this feature:
BLAST of CN189273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATV_NPVBS1.126e-1735.80Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATV_NPVAC1.126e-1737.80Viral cathepsin OS=Autographa californica nuclear ... [more]
CATK_MOUSE1.126e-1733.95Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
LMCPA_LEIME1.470e-1735.54Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CPGP2_ZINOF1.470e-1755.70Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CPP3_ENTHI1.920e-1734.32Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATV_NPVLD1.920e-1736.53Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVRO2.508e-1737.80Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CYSP_THEPA3.275e-1732.61Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATK_HUMAN3.275e-1735.22Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189273 ID=CN189273; Name=CN189273; organism=Citrus sinensis; type=EST; length=674bp
GAGGTAATCATTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGAC
TCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGAC
CTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCC
GTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAG
CTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAA
TCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGA
GCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCT
GCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAAC
GAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTC
ACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCT
TACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGT
AGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCAT
CCCAAGCCTTTGAATACATCAAAG
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