CN189273

Overview
NameCN189273
Unique NameCN189273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.381e-22
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 2
Query:  314 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            S+ + +N F D + EEF++   G         K   +     +P + DWRE G ++PVKDQG CGSCW FS TG+LE       GK ISL+EQ LVDC+    N+GCNGG     F Y++
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQ 134          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.381e-22
Identity = 64/164 (39.02%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            F  F   Y + YES EE + R   F++N+     I++ +R    Y  G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQY--GITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKV--DKACLGGLPSNAYAAIK 324          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.416e-22
Identity = 66/200 (33.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  146 ETSVLQVIG---QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRH----------------------RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQAFNNQGCNGGLPSQAFEY 667
            E SV Q+ G     ++A  F  F  +Y + Y+ + E   ++  F  N   I+  N     Y++ +N+F+D+S ++F+ +                        G  +N   ++ G + L ADV PE  D+RE GIV   KDQG CGSCW F++ G++E  Y +   K I +LSEQ++VDC++   N GC+GG P  +F Y
Sbjct:  218 EVSVAQIEGLFVNLKYASKFFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGAN-LLADV-PEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKL--NFGCDGGHPFYSFIY 413          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.416e-22
Identity = 63/169 (37.28%), Postives = 86/169 (50.89%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTA------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  FA +Y K Y S EE  ++   F  NL +I   N         +N+++D +     R     RLG  +N SA T     +         +LPET DWR+   V+PVK+Q  CGSCW FST  ++E+ Y+  + K ++LSEQ LV+C     N GC GGL   A E I
Sbjct:   32 FKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCDNI--NNGCAGGLMHWALESI 198          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.532e-22
Identity = 63/167 (37.72%), Postives = 83/167 (49.70%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            F  F  +Y K+Y+  +E + RF  F +NL  I + N    S    +N  AD S  E  +   G   +     K N   T  V+        P++ DWR+   V+ VK Q  CGSCW FS   ++E+ YH      + LSEQQLVDC +   N GCNGGL S AFE I
Sbjct:   43 FNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKV--NNGCNGGLMSWAFEGI 207          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21
Identity = 60/165 (36.36%), Postives = 85/165 (51.52%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 673
            F +F  R+G+ Y S  E ++R   F +NL  I   N   + S + G+ +FAD +  E+ + R G  Q   A   G            LP+  DWR+   V+ VK+QG CGSCW FS TG++E  Y    G+    SEQ+L+DC     +  CNGGL   A++ IK
Sbjct:  308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEY-KERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT--TDSACNGGLMDNAYKAIK 469          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.192e-21
Identity = 63/163 (38.65%), Postives = 87/163 (53.37%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYI 670
            + Y K Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T + N       LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI
Sbjct:   33 KTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSN---QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYI 192          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.862e-21
Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  167 IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNR--KGLSYRLGLNKFADWSWEE----------------------FQRHRLGAAQNCSATTKG--NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            I   ++A  F +F + + K+Y++++E   +F  F  N   I++ N+  K   Y+  +N+F+D+S EE                      F+ H           T G  N K     +PE  D+RE GIV   KDQG CGSCW F++ G++E+ + +     +S SEQ++VDC++  +N GC+GG P  +F Y+
Sbjct:  216 INNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSK--DNFGCDGGHPFYSFLYV 407          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.862e-21
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  209 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEEFQRHRLGAAQ--NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYI 670
            + + K Y+   E ++R   + KNL  I   N +   G+ +Y++G+N   D + EE    R+GA +    S  T      +   LP+T DWRE G V+ VK QG CG+CW FS  G+LE       GK ISLS Q LVDC+  + + N+GC GG  ++AF+YI
Sbjct:   41 KTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYI 201          
BLAST of CN189273 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.862e-21
Identity = 65/172 (37.79%), Postives = 88/172 (51.16%), Query Frame = 2
Query:  194 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRS--TNRKGLSYRLGLNKFADWSWEEFQRHRLGA---------AQNCSATTKGNHKLTADVLPETKDWRESGIVS--PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 670
            +A +  +Y + Y S  +   RF  FS NL+ IR+   + +  +Y L LN+FAD S +EF    L           A N +   KG     A+V     DW ++  V    VK+QG CGSCW FS  G+LE        K   LSEQ LVDC+  ++N+GCNGG    AFEY+
Sbjct:   26 YANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNANFQYKG-----AEV-----DWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYV 187          
The following BLAST results are available for this feature:
BLAST of CN189273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL6_HUMAN3.381e-2242.50Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATF_MOUSE3.381e-2239.02Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP_PLAVS4.416e-2233.00Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATV_GVCP4.416e-2237.28Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATV_GVXN7.532e-2237.72Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CPR1_DROME1.678e-2136.36Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATS_CANFA2.192e-2138.65Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CYSP_PLAFA2.862e-2131.44Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CATS_MOUSE2.862e-2138.89Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL2_PARTE2.862e-2137.79Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189273 ID=CN189273; Name=CN189273; organism=Citrus sinensis; type=EST; length=674bp
GAGGTAATCATTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGAC
TCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGAC
CTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCC
GTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAG
CTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAA
TCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGA
GCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCT
GCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAAC
GAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTC
ACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCT
TACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGT
AGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCAT
CCCAAGCCTTTGAATACATCAAAG
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