CN189270

Overview
NameCN189270
Unique NameCN189270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.453e-16
Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = -2
Query:  134 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANK-IKNRVSVPIF----VNPAPDAVFGPLPE---SGEIPIYKQLVFSDYFNFYFSKPHDGKKTI 490
            HSD S +TVL+ D+I GL V    +  W  VP + GAL+INIGD+LQ+I+NDK+ S++HRV+AN+  + RVSV  F    V P P  V+GP+ E       P Y++    DY  ++  K   G   +
Sbjct:  241 HSDGSFLTVLLPDNIEGLQV--CREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNP-RVYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGGTSAL 364          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.898e-16
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = -2
Query:  179 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPE--SGEIPI-YKQLVFSDY 490
            H+D+S ITVL+ +++ GL V   +D  W     I  AL+++IGD ++I+SN KYKS+ HR   NK K R+S P+F+ P PD   GP+P+  + E P  +K   + DY
Sbjct:  220 HTDMSAITVLVPNEVPGLQV--YKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDY 324          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.898e-16
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = -2
Query:  140 HSDISTITVLIQDD-IGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKI-KNRVSVPIFVNPAPDAVFGPLP-------ESGEIPIYKQLVFSDYFNFYFSKPHDGKK 490
            H+D   I +L QDD + GL +  ++D  WI VPP++ A+V+N+GD L++I+N +YKS+ HRV+       R+S+  F NP  DAV  P P       +  +  +Y + VF DY   Y       K+
Sbjct:  177 HTDAGGIILLFQDDKVSGLQL--LKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAKE 300          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.479e-16
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  158 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLP-ESGEIPIYKQ-LVFSDYFNFYFSK 490
            H+D  TIT+L+QD +GGL        TWI V P+ GA V+N+GD    +SN ++K+ +H+ V N   +R+S+  F NP+PDA   PL    GE  I ++ + F+D +    +K
Sbjct:  218 HTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPLAIREGENSIMEEPITFADLYRRKMAK 330          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.238e-16
Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  230 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPL 490
            H+D  TIT+L+QD +GGL       ++WI V P++GA V+N+GD    +SN ++K+ +H+ V N   +R+S+  F NPAP+A+  PL
Sbjct:  215 HTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPL 301          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.229e-16
Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = -2
Query:  179 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPE---SGEIPIYKQLVFSDY 490
            H+D+S IT+L+ +++ GL V   +D  W  V  I  AL+++IGD ++I+SN KYKS+ HR   NK K R+S P+F+ P  +   GP+P+       P +K   + DY
Sbjct:  234 HTDMSYITILVPNEVQGLQV--FKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDY 338          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.523e-16
Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = -2
Query:  158 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLP--ESGEIPIYKQLVFSDYFNFYFSK 490
            H+D  TIT+L+QD +GGL        TWI V P++GA V+N+GD    +SN ++K+ +H+ V N   +R+S+  F NPAP+A   PL   E  +  +   + F++ +    SK
Sbjct:  218 HTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSK 330          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.523e-16
Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = -2
Query:  158 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLP-ESGEIPIYKQ-LVFSDYFNFYFSK 490
            H+D  TIT+L+QD +GGL        TWI V P++GA V+N+GD    +SN ++K+ +H+ V N   +R+S+  F NPAP+A   PL    GE  + ++ + F++ +    S+
Sbjct:  218 HTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSR 330          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.523e-16
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = -2
Query:  176 HSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLP-ESGEIPIYKQ-LVFSDYF 490
            H+D  TIT+L+QD +GGL         WI V PI GA V+N+GD    +SN ++K+ +H+ V N   +R+S+  F NPAPDA   PL    GE PI ++ + F++ +
Sbjct:  220 HTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWPLAVREGEEPILEEPITFTEMY 326          
BLAST of CN189270 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.421e-16
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -2
Query:  179 PHSDISTITVLIQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDY 493
            PH+D   +T+L QD +GGL +  I+D+ WI V P   AL+INIGD+ Q  SN  YKS+EHRV+ N    R S   F+ P+ DAV   +  S + P Y+   F ++
Sbjct:  214 PHTDSDFLTILYQDQVGGLQL--IKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAV---IECSSDRPAYRNFSFREF 313          
The following BLAST results are available for this feature:
BLAST of CN189270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCH2_ARATH1.453e-1641.731-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_EUSGR1.898e-1642.06Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCO1_CUCME1.898e-1636.511-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
FL3H_DIACA2.479e-1638.94Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_CALCH3.238e-1642.53Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FLS_PETHY4.229e-1639.25Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FL3H_VITVI5.523e-1637.17Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_PETCR5.523e-1637.17Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_HORVU5.523e-1641.12Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
G2OX8_ARATH9.421e-1642.86Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189270 ID=CN189270; Name=CN189270; organism=Citrus sinensis; type=EST; length=497bp
GGCAGAACGAGACTTTTATTTTGAATTAAGGGATATCATTATTACACTCC
AAAGAAACTGGAATTTCATGCATGGAAAGAAGGCTACTCCCATCCCTATC
GTTATTATTTTCCCATCATATTCTTGCATAGTCAATGGTCTTCTTCCCAT
CATGGGGTTTACTGAAGTAGAAGTTGAAGTAATCTGAGAAAACAAGTTGC
TTGTATATTGGTATCTCTCCACTTTCTGGCAAAGGACCGAAAACGGCATC
AGGTGCAGGGTTCACAAAGATGGGAACTGAAACCCTGTTCTTGATTTTAT
TGGCAACAACTCGATGCTCGATACTTTTGTATTTATCATTGCTTATTATC
TGCAGCACATCACCAATATTAATCACAAGGGCCCCTTTGATTGGAGGGAC
GTGGATCCAGGTGTCATCCTCTATCCCTCTCACGTAAAGCCCACCAATAT
CATCTTGAATAAGAACAGTAATGGTTGATATATCGGAGTGAGGTCCT
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