CN189261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61 Identity = 112/164 (68.29%), Postives = 144/164 (87.80%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 597 N+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANN++R+TI+RYKKAC+DS+N ++ E N +YQQE+ KLR+QI+ IQN NR+++G++LS+L+ KELK +E RLEK I R+RSKK+E+LL EIE +KREI+L N+N+YLR +++E ER Sbjct: 13 NSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVER 176
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57 Identity = 107/167 (64.07%), Postives = 141/167 (84.43%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITEANT-QFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERA 600 N T+RQVTFCKRRNGLLKKAYEL++LCDAE+ALIVFSSRGRLYE++N NS R+TI+RYKKA A +S + + N+ Q++QQEA K+R QI+ +QN NRH++GE++ + KELK+LE RLEKGI R+RSKK+E+L +EIE+M+KRE LQN+NM+LRA+++E ERA Sbjct: 13 NKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERA 179
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 9.187e-57 Identity = 113/167 (67.66%), Postives = 141/167 (84.43%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGS-ITEANTQ-FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 597 NTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN+ V+ATIDRYKKA A S G+ + E N Q +YQQE+ KLR QI+ +QN N+H++G+ +S L+ KELK LE+RLEKGI ++R++KNE+L +EI +M KREI+LQNDNM LR +I+E E+ Sbjct: 13 NTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQ 179
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34 Identity = 77/165 (46.67%), Postives = 108/165 (65.45%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERA 600 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ + + +TI+RY + C + S + E TQ + QE TKL+ + + NR++LGE L + KEL+ LE +LE + R +K ++++ E+E + K+E QL + N L+ + A Sbjct: 13 NKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHA 176
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34 Identity = 71/159 (44.65%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI 582 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ + + T++RY+ C ++ + + + TQ + E +KL+ + +Q RH+LGE L L+ KEL+ LE +LE + + R +K ++++ ++E + ++E QL N L+ ++ Sbjct: 13 NKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNAL-SETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.407e-34 Identity = 74/160 (46.25%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARIS 585 N+T+RQVTF KRRNG+ KKA EL++LCDAEV L++FSS GRLYEY++ S+++ IDRY K+ D + + +F+Q+EA LR+Q+ +Q +R ++GE LS LN KEL++LE +LE + VR+KK+ +L+ EI + ++ + +NM L +IS Sbjct: 13 NSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKS-KDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKIS 171
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33 Identity = 84/223 (37.67%), Postives = 127/223 (56.95%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGS-ITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI-----SENERAXXXXXXXXXXXXGGGHVYEPAASQPYDRNFLPVNLLEPNHQYARQDDQAPSS 756 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ + + T+++Y C ++ S + Q + QE ++L+ ++ +Q RH+LGE L L+ KEL+ LE +LE + + R +K ++++ +++ + ++E QL N L+ ++ S N R+ GG V A P D + P L +Q+ R + P S Sbjct: 13 NKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSNCRSAIQDSWVHGTVVSGGRVLN--AQPPPDIDCEP-TLQIGYYQFVRPEAANPRS 232
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.251e-33 Identity = 68/163 (41.72%), Postives = 112/163 (68.71%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENE 594 N T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LI+FS +G+LYE+A+++++ TIDRY + D + ++E N Q + EA + ++I +++ R +LGE + T + +EL+ +E +LEK + +R++K ++ +IE ++++E L +N L + +E Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHE 175
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32 Identity = 75/163 (46.01%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISEN 591 N NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ + S + T++RY++ C+ S S T+ QE KL+ ++ +Q +R++LGE L L+ KEL+ LE +L+K + ++RS K + +L ++ ++K+E L N L+ ++ E+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQR-CSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEES 174
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32 Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPA 663 N NRQVTF KRR LLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++ S+ T+++Y+K C S +I TQ QQE KL+ ++ +Q R++LGE L L KEL+ LE +L+ + ++RS + + +L ++ +++RE L N L+ R E+ +A G+ +PA Sbjct: 13 NKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPA 198 The following BLAST results are available for this feature:
BLAST of CN189261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189261 ID=CN189261; Name=CN189261; organism=Citrus sinensis; type=EST; length=770bpback to top |