CN189261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.330e-30 Identity = 71/165 (43.03%), Postives = 109/165 (66.06%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 588 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL++LE +L+ + ++R+ + + +L ++ ++ +E L N LR R+++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.573e-30 Identity = 66/158 (41.77%), Postives = 108/158 (68.35%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRAR 579 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S + TI+RY+ ++ ++ + + + + +A L +++ ++ R +LGE L + +EL +LE +LE+ + +R +K ++L ++ + ++E++L+ DN LR + Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREK 169
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 71/162 (43.83%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 588 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S + T+DRY+K S + + +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VRS K + +L ++ ++ +E L N L ++ + Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDD 174
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 70/167 (41.92%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS----VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENE 594 N NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS +G+L+EY++ S V +RY A P S A T + E ++L+ +I ++ RH LGE L ++ K+L+NLE +LE + +RS+KN+++ + ++++E ++Q +N L +I E E Sbjct: 13 NKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE 178
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.633e-29 Identity = 72/164 (43.90%), Postives = 108/164 (65.85%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFY----QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI 582 N NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ + +S+ T++RY+K C + G++T QQE KL+ + +Q R+++GE L L+ K+L+ LE +L+ + ++RS + + +L ++ ++++E L N LR R+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQK-CNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM 175
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.785e-29 Identity = 66/163 (40.49%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARIS 585 NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY+++++S+++ I+RY++A + NP S +F+Q+E T LR+Q++ + + NR +LGE +S ++L+ L+ ++E + +R+KK+++L EI + ++ +Q +N LR + + Sbjct: 13 NTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMS----EAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFN 171
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.638e-29 Identity = 77/217 (35.48%), Postives = 122/217 (56.22%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK-ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAASQ----PYDRNFLPVNLLEPNHQYARQD 738 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ + A+ ++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+KN+++ I ++++E +Q N L +I E E+ G ++ P Q PY + P L Y +D Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEED 228
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.638e-29 Identity = 78/222 (35.14%), Postives = 122/222 (54.95%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK-ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAASQ------PYDRNFLPVNLLEPNHQYARQDDQA 747 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ + A+ ++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +R++KN+++ I ++K+E +Q N L +I E E+ G ++ P Q PY + P L Y D A Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMA 233
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.751e-29 Identity = 67/162 (41.36%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 588 N +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++S + T++RY++ S + + T Q QE L+ + +Q R++LGE L+ L EL+ LE+++ + + ++RS+K ++LL E+ ++++E LQ+ N L+ ++ E Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.751e-29 Identity = 61/146 (41.78%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREI 543 N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++A++S+++ I+RY + D + + + +QQEA LR+Q+ +Q +R +LG+ LS L+ ++L+NLE++LE + +R +K+ +++ +I+ + ++ + Sbjct: 13 NATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157 The following BLAST results are available for this feature:
BLAST of CN189261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189261 ID=CN189261; Name=CN189261; organism=Citrus sinensis; type=EST; length=770bpback to top |