CN189259

Overview
NameCN189259
Unique NameCN189259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:20..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.798e-56
Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS++   TAIPDGWMGLD+GPDAIK F  AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAE+ GKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  267 LPTDVVLADNFAPDANSQIADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.501e-55
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F EAL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  266 LPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.448e-55
Identity = 105/135 (77.78%), Postives = 115/135 (85.19%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F  AL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  266 LPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.659e-54
Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+VV   AIPD WMGLD+GP ++K F EAL   KT+IWNGPMGVFEFD+FA GTEAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  266 LPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.659e-54
Identity = 105/135 (77.78%), Postives = 115/135 (85.19%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD F+ DANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  267 LPTDVVLADDFSPDANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+V   TAIPDGWMGLD+GPDA+K F  AL   +T+IWNGPMGVFEF+KFA GT AIA  LAELS KG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  267 LPTDVVLADNFAPDANSQVADVTAIPDGWMGLDIGPDAVKVFQAALADCQTVIWNGPMGVFEFEKFATGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALNDA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.828e-54
Identity = 102/135 (75.56%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+++K F EAL   +++IWNGPMGVFEFD+FA GTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVG+A +MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  267 LPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.305e-54
Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+V    AIP+GWMGLD+GPD+IK F +AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAELS KG  TIIGGGDSVAAVEK GLA +MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  267 LPTDVVLADNFAPDANSQVASIDAIPEGWMGLDIGPDSIKVFQDALGDCKTVIWNGPMGVFEFDKFAAGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAAQMSHISTGGGASLELLEGKVLPGVAALDEA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.305e-54
Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA  ANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  267 LPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.235e-54
Identity = 104/135 (77.04%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 410
            LPTDVV+AD FA DANS+     AIPDGWMGLD+GPD+IK F EAL   +T+IWNGPMGVFEFDKFA GT +IA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD A
Sbjct:  267 LPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFATGTNSIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDAA 401
The following BLAST results are available for this feature:
BLAST of CN189259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SYNS98.798e-5679.26Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ANAVT1.501e-5578.52Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_ANASP7.448e-5577.78Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_THEEB1.659e-5477.04Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_PROM31.659e-5477.78Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNPW2.167e-5477.78Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNE74.828e-5475.56Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_SYNR36.305e-5477.78Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMM6.305e-5477.78Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNSC8.235e-5477.04Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189259 ID=CN189259; Name=CN189259; organism=Citrus sinensis; type=EST; length=713bp
GCGGGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTGCTGATGCC
AACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGGATGGGCTT
GGATGTTGGACCTGATGCCATCAAGTCATTCAGTGAAGCTTTGGATACTA
CTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAA
TTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGG
GAAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAG
AGAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGA
GCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCT
TGATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCAT
TTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTT
AAACTTTATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAA
ATTCTTTCTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCC
ATTTTGGAACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTC
TTGTTCCTTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCAT
GAATCCTGGCACT
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