CN189259

Overview
NameCN189259
Unique NameCN189259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_LACCB (Phosphoglycerate kinase OS=Lactobacillus casei (strain BL23) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37
Identity = 77/134 (57.46%), Postives = 97/134 (72.39%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            LP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVFE   +A GT  + + L +L  K  TTIIGGGDS AA +++G+A K++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  265 LPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVFEMSNYAEGTLEVGRALGDL--KDATTIIGGGDSTAAAKQLGIAPKITHISTGGGASLEYLEGKTLPGIAAISD 395
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_LACC3 (Phosphoglycerate kinase OS=Lactobacillus casei (strain ATCC 334) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37
Identity = 77/134 (57.46%), Postives = 97/134 (72.39%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            LP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVFE   +A GT  + + L +L  K  TTIIGGGDS AA +++G+A K++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  265 LPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVFEMSNYAEGTLEVGRALGDL--KDATTIIGGGDSTAAAKQLGIAPKITHISTGGGASLEYLEGKTLPGIAAISD 395
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_CHICK (Phosphoglycerate kinase OS=Gallus gallus GN=PGK PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANS-KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 401
            LP D + ADKF   A + +   A+ IP GWMGLD GP+++K F E +   K I+WNGP+GVFE+DKF+ GT+A+  K+ E++GKG  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL
Sbjct:  282 LPVDFITADKFDEHAQTGEATVASGIPAGWMGLDCGPESVKKFVEVVGRAKQIVWNGPVGVFEWDKFSKGTKALMDKVVEVTGKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 414
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_MYCMM (Phosphoglycerate kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAD-KMSHISTGGGASLELLEGKTLPGVLAL 401
            LP DVV+ +KFAAD+  + V A AIP   MGLD+GP ++K F+  L   KTI WNGPMGVFEF  +A GT  IA+ +   +GKG  +++GGGDS AAV  +G+++   SHISTGGGASLE LEGKTLPG+  L
Sbjct:  270 LPVDVVVTEKFAADSPPQTVAADAIPADTMGLDIGPGSVKRFAALLSNAKTIFWNGPMGVFEFPAYATGTRGIAEAIVAATGKGAFSVVGGGDSAAAVRALGISEGSFSHISTGGGASLEYLEGKTLPGIEVL 402
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of CN189259 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    6 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 407
            +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  262 MPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
The following BLAST results are available for this feature:
BLAST of CN189259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_LACCB3.144e-3757.46Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_LACC33.144e-3757.46Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_CHICK3.144e-3756.39Phosphoglycerate kinase OS=Gallus gallus GN=PGK PE... [more]
PGK_MYCMM4.106e-3756.39Phosphoglycerate kinase OS=Mycobacterium marinum (... [more]
PGK_BACCZ4.106e-3752.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC34.106e-3752.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC14.106e-3752.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC04.106e-3752.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN4.106e-3752.99Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAH4.106e-3752.99Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189259 ID=CN189259; Name=CN189259; organism=Citrus sinensis; type=EST; length=713bp
GCGGGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTGCTGATGCC
AACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGGATGGGCTT
GGATGTTGGACCTGATGCCATCAAGTCATTCAGTGAAGCTTTGGATACTA
CTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAA
TTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGG
GAAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAG
AGAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGA
GCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCT
TGATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCAT
TTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTT
AAACTTTATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAA
ATTCTTTCTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCC
ATTTTGGAACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTC
TTGTTCCTTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCAT
GAATCCTGGCACT
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