CN189258

Overview
NameCN189258
Unique NameCN189258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = -3
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  290 IAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = -3
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  290 IAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_MYCVP (Phosphoglycerate kinase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32
Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = -3
Query:  334 SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 684
            ++ V A  IPD  MGLD+GP+++K F+  L   KTI WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  290 AETVAADRIPDDKMGLDIGPESVKRFTALLSNAKTIFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIQVLE 407          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = -3
Query:  331 ANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 690
            AN+K V     IP GW GLD GP++ K F+  +   KTI+WNGP GVFEF+KFAAGT+A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  294 ANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32
Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = -3
Query:  331 ANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 690
            A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  276 ATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_LACBA (Phosphoglycerate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 64/110 (58.18%), Postives = 82/110 (74.55%), Query Frame = -3
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            +PDG+M LD+GP ++  F + L   KT++WNGPMGVFE   +A GT  I K L  L+     TI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  292 VPDGYMALDIGPKSVAEFKDVLKDAKTVVWNGPMGVFEMSNYAEGTLEIGKFLGTLTN--AKTIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKTLPGIAAISD 399          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOBA (Phosphoglycerate kinase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = -3
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            IP G MGLD+GP   K +++A+   KT+IWNGPMGVFEF+ F  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  290 IPAGTMGLDIGPKTEKLYADAVKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAD---SNATTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGISALND 396          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CANGA (Phosphoglycerate kinase OS=Candida glabrata GN=PGK1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = -3
Query:  331 ANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 690
            AN+K+V     IP GW GLD GP++ K F+  +   KTI+WNGP GVFEF+KFA+GT+A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  294 ANTKIVSDKEGIPAGWQGLDNGPESRKLFAATIAKAKTIVWNGPPGVFEFEKFASGTKAMLDEVVKSSTSGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_TRIRE (Phosphoglycerate kinase OS=Trichoderma reesei GN=pgk1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32
Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = -3
Query:  337 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 666
            + IPDGWMGLD G  +I+ + EA+   KTI+WNGP GVFEFDKFA GT+A    + E    G   IIGGGD+     K G+ DK+SH+STGGGASLELLEGK LPGV+AL
Sbjct:  304 SGIPDGWMGLDCGEKSIELYKEAIADAKTILWNGPAGVFEFDKFANGTKATLDAVVEGCKNGKIVIIGGGDTATVAAKYGVEDKLSHVSTGGGASLELLEGKELPGVVAL 413          
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_SCHPO (Phosphoglycerate kinase OS=Schizosaccharomyces pombe GN=pgk1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32
Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = -3
Query:  337 NSKVVPATA---IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 687
            ++KV  ATA   IPDGWMGLD GP +   F+E + T+KTI+WNGP GVFEFD FA GT+++     +    G   I+GGGD+    +K G  D +SH+STGGGASLELLEGK LPGV+AL
Sbjct:  292 DAKVGSATAEEGIPDGWMGLDCGPKSSAKFAEVITTSKTIVWNGPAGVFEFDNFAKGTKSMLDACVKTCEAGNVVIVGGGDTATVAKKYGKEDALSHVSTGGGASLELLEGKALPGVVAL 411          
The following BLAST results are available for this feature:
BLAST of CN189258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOPE1.705e-3262.73Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP11.705e-3262.73Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_MYCVP2.227e-3256.78Phosphoglycerate kinase OS=Mycobacterium vanbaalen... [more]
PGK_YEAST2.909e-3256.20Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_BACC42.909e-3253.33Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_LACBA3.799e-3258.18Phosphoglycerate kinase OS=Lactobacillus brevis (s... [more]
PGK_CLOBA3.799e-3261.82Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CANGA3.799e-3255.37Phosphoglycerate kinase OS=Candida glabrata GN=PGK... [more]
PGK_TRIRE4.962e-3260.00Phosphoglycerate kinase OS=Trichoderma reesei GN=p... [more]
PGK_SCHPO4.962e-3255.83Phosphoglycerate kinase OS=Schizosaccharomyces pom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189258 ID=CN189258; Name=CN189258; organism=Citrus sinensis; type=EST; length=692bp
TTTTTCAGAACAATGGAATATTGTAGTGCCAGGATTCATGCATTATCTAA
CAATCATCAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCA
GGAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCA
GAAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCT
TACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCAC
TCTGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAA
AAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACAC
CAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTG
GAGATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAAC
TGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCG
CAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCA
AACACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGC
TTCACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAAC
CATCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCAT
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