CN189258

Overview
NameCN189258
Unique NameCN189258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = -3 
Query:  331 ANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 690
            A S V     +P+  +G+D+GP+   ++   +   +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  278 AESSVASIADMPNNLIGVDIGPETAAAYRNEIIGARTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CANMA (Phosphoglycerate kinase OS=Candida maltosa GN=PGK1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  331 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 666
            T IPD WMGLD GP + K F++A+   KTI+WNGP GVFEFDKFA GT+++     + +  G   IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  304 TGIPDKWMGLDCGPKSRKLFADAVAKAKTIVWNGPPGVFEFDKFAEGTKSLLDDAVKSAEVGNIVIIGGGDTATVAKKYGVVDKLSHVSTGGGASLELLEGKELPGVTALSN 415
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_ASHGO (Phosphoglycerate kinase OS=Ashbya gossypii GN=PGK1 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = -3 
Query:  337 ANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 690
            AN+K+V A+  IP GW GLD GP++ K FSE + + KTI+WNGP GVFE  KF+ GT+A+     + S  G T IIGGGD+    +K G+ +K+SH+STGGGASLELLEGK LPGV  L
Sbjct:  293 ANTKIVSASEGIPSGWEGLDCGPESRKLFSETIASAKTIVWNGPPGVFEIPKFSEGTQAMLAAAVKASEAGSTVIIGGGDTATVAKKYGVVEKISHVSTGGGASLELLEGKDLPGVTFL 411
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 65/117 (55.56%), Postives = 88/117 (75.21%), Query Frame = -3 
Query:  331 KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 681
            +VV    +P+  +G+D+GP  I+ +S+ +    T++WNGPMGVFE  +FA GT+AIAK L+E  G   TTI+GGGDS AA+E++G ADK++HISTGGGASLE LEGK LPG+  L+D
Sbjct:  280 EVVDIDKMPEDQIGVDIGPKTIEEYSKVIKHAMTVVWNGPMGVFEIPEFAKGTKAIAKALSECKG---TTIVGGGDSAAAIEQLGYADKVTHISTGGGASLEFLEGKVLPGIDILND 393
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CANAL (Phosphoglycerate kinase OS=Candida albicans GN=PGK1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = -3 
Query:  331 SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 684
            S    A  IPD WMGLD GP +++ F +A+   KTI+WNGP GVFEF+KFA GT+++     + +  G   IIGGGD+    +K G+ +K+SH+STGGGASLELLEGK LPGV+AL +
Sbjct:  298 SSATDAEGIPDNWMGLDCGPKSVELFQQAVAKAKTIVWNGPPGVFEFEKFANGTKSLLDAAVKSAENGNIVIIGGGDTATVAKKYGVVEKLSHVSTGGGASLELLEGKDLPGVVALSN 415
The following BLAST results are available for this feature:
BLAST of CN189258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLCH6.480e-3251.67Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_CANMA6.480e-3258.04Phosphoglycerate kinase OS=Candida maltosa GN=PGK1... [more]
PGK_ASHGO6.480e-3256.30Phosphoglycerate kinase OS=Ashbya gossypii GN=PGK1... [more]
PGK_THETN8.463e-3255.56Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_CLOBL8.463e-3260.00Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK8.463e-3260.00Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ8.463e-3260.00Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH8.463e-3260.00Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB18.463e-3260.00Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CANAL8.463e-3253.39Phosphoglycerate kinase OS=Candida albicans GN=PGK... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189258 ID=CN189258; Name=CN189258; organism=Citrus sinensis; type=EST; length=692bp
TTTTTCAGAACAATGGAATATTGTAGTGCCAGGATTCATGCATTATCTAA
CAATCATCAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCA
GGAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCA
GAAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCT
TACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCAC
TCTGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAA
AAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACAC
CAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTG
GAGATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAAC
TGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCG
CAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCA
AACACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGC
TTCACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAAC
CATCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCAT
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