CN189258

Overview
NameCN189258
Unique NameCN189258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK1_PONAB (Phosphoglycerate kinase 1 OS=Pongo abelii GN=PGK1 PE=2 SV=4)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = -3 
Query:  331 ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 669
            A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  304 ASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK1_PANTR (Phosphoglycerate kinase 1 OS=Pan troglodytes GN=PGK1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = -3 
Query:  331 ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 669
            A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  304 ASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK1_MACFA (Phosphoglycerate kinase 1 OS=Macaca fascicularis GN=PGK1 PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = -3 
Query:  331 ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 669
            A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  304 ASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK1_HUMAN (Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = -3 
Query:  331 ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 669
            A+ IP GWMGLD GP++ K ++EA+   K I+WNGP+GVFE++ FA GT+A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  304 ASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_MYCUA (Phosphoglycerate kinase OS=Mycobacterium ulcerans (strain Agy99) GN=pgk PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 65/116 (56.03%), Postives = 82/116 (70.69%), Query Frame = -3 
Query:  337 KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAD-KMSHISTGGGASLELLEGKTLPGVLAL 681
            + V A AIP   MGLD+GP ++K F+  L   KTI WNGPMGVFEF  +A GT  IA+ +   +GKG  +++GGGDS AAV  +G+++   SHISTGGGASLE LEGKTLPG+  L
Sbjct:  287 QTVAADAIPADTMGLDIGPGSVKRFAALLSNAKTIFWNGPMGVFEFPAYATGTRGIAEAIVAATGKGAFSVVGGGDSAAAVRALGISEGSFSHISTGGGASLEYLEGKTLPGIEVL 402
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_MYCMM (Phosphoglycerate kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pgk PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 65/116 (56.03%), Postives = 82/116 (70.69%), Query Frame = -3 
Query:  337 KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAD-KMSHISTGGGASLELLEGKTLPGVLAL 681
            + V A AIP   MGLD+GP ++K F+  L   KTI WNGPMGVFEF  +A GT  IA+ +   +GKG  +++GGGDS AAV  +G+++   SHISTGGGASLE LEGKTLPG+  L
Sbjct:  287 QTVAADAIPADTMGLDIGPGSVKRFAALLSNAKTIFWNGPMGVFEFPAYATGTRGIAEAIVAATGKGAFSVVGGGDSAAAVRALGISEGSFSHISTGGGASLEYLEGKTLPGIEVL 402
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_DICDI (Phosphoglycerate kinase OS=Dictyostelium discoideum GN=pgkA PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 67/121 (55.37%), Postives = 78/121 (64.46%), Query Frame = -3 
Query:  331 ANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 690
            AN K V     IP+GWMGLD GP+ IK   + +   KTI+WNGPMGVFE   F AGT+A    +   +  G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL D
Sbjct:  299 ANIKTVTQDQGIPEGWMGLDCGPETIKENRDTISRAKTIVWNGPMGVFEKSNFEAGTKAAMDDVVNATTNGAITIIGGGDTATCAAKYNTEDKVSHVSTGGGASLELLEGKELPGVTALSD 419
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CORA7 (Phosphoglycerate kinase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 63/121 (52.07%), Postives = 87/121 (71.90%), Query Frame = -3 
Query:  334 ANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALD 690
            A +KVV    IP+GW  LD+GP+++K F E + ++KT+ WNGPMGVFE + F+ GT  +A+ + + + K G  T++GGGDS A+V  +GL ++  SHISTGGGASLE LEGK LPGV  L+
Sbjct:  284 AENKVVALDGIPEGWQSLDIGPESVKKFDEVIASSKTVFWNGPMGVFEMEAFSKGTAGVAQSIIDATAKNGSFTVVGGGDSAASVRLLGLDEEGFSHISTGGGASLEFLEGKELPGVKVLE 404
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK_CLOB8 (Phosphoglycerate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgk PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 66/110 (60.00%), Postives = 81/110 (73.64%), Query Frame = -3 
Query:  331 IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 660
            IP G MGLD+GP     +++A+   KT+IWNGPMGVFEF+ +  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  285 IPVGNMGLDIGPKTETLYADAIKDAKTVIWNGPMGVFEFENYNKGTIAVAKAMADADA---TTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGIAALND 391
[Close]
BLAST of CN189258 vs. ExPASy Swiss-Prot
Match: PGK2_MACFA (Phosphoglycerate kinase 2 OS=Macaca fascicularis GN=PGK2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = -3 
Query:  331 KVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 681
            K   A+ IP GWMGLD GP++ K+ ++ +   + I+WNGP+GVFE+D FA GT+A+  ++ + + KG  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  300 KATVASGIPPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFAKGTKALMDEIVKATSKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVEALSN 416
The following BLAST results are available for this feature:
BLAST of CN189258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK1_PONAB4.200e-3154.87Phosphoglycerate kinase 1 OS=Pongo abelii GN=PGK1 ... [more]
PGK1_PANTR4.200e-3154.87Phosphoglycerate kinase 1 OS=Pan troglodytes GN=PG... [more]
PGK1_MACFA4.200e-3154.87Phosphoglycerate kinase 1 OS=Macaca fascicularis G... [more]
PGK1_HUMAN4.200e-3154.87Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 ... [more]
PGK_MYCUA5.486e-3156.03Phosphoglycerate kinase OS=Mycobacterium ulcerans ... [more]
PGK_MYCMM5.486e-3156.03Phosphoglycerate kinase OS=Mycobacterium marinum (... [more]
PGK_DICDI5.486e-3155.37Phosphoglycerate kinase OS=Dictyostelium discoideu... [more]
PGK_CORA75.486e-3152.07Phosphoglycerate kinase OS=Corynebacterium aurimuc... [more]
PGK_CLOB87.164e-3160.00Phosphoglycerate kinase OS=Clostridium beijerincki... [more]
PGK2_MACFA7.164e-3152.99Phosphoglycerate kinase 2 OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189258 ID=CN189258; Name=CN189258; organism=Citrus sinensis; type=EST; length=692bp
TTTTTCAGAACAATGGAATATTGTAGTGCCAGGATTCATGCATTATCTAA
CAATCATCAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCA
GGAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCA
GAAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCT
TACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCAC
TCTGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAA
AAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACAC
CAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTG
GAGATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAAC
TGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCG
CAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCA
AACACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGC
TTCACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAAC
CATCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCAT
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