CN189256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = -2 Query: 226 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 567 EGQVIGCHT + W QL K+ E+ +L+V+DFTASW PCR IAP +LAKK + + +F KVDVDEL+SVA ++ VEAMPTF+F+K G++VDK+VGA KE+LQ I KH +A Sbjct: 5 EGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.068e-33 Identity = 66/114 (57.89%), Postives = 89/114 (78.07%), Query Frame = -2 Query: 226 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 567 EG+VI CHTVE W E+L+ +NE+K+L+V+DFTA+W PCRFIAP A+LAKK +V+F KVDVDEL +VA ++ V+AMPTF+F+KEG+I + VVGA KEE+ + KH +A Sbjct: 4 EGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.430e-32 Identity = 63/109 (57.80%), Postives = 83/109 (76.15%), Query Frame = -2 Query: 238 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 564 G+VI H++E W Q++++N K+LVV+DFTASW GPCR +AP A+LAKK P +FLKVDVDELK +A ++VEAMPTF+F+KEG + D+VVGA KEEL + H A Sbjct: 18 GEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLHAA 126
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.431e-30 Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = -2 Query: 226 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 564 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.431e-30 Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = -2 Query: 226 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 564 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.431e-30 Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = -2 Query: 226 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 564 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 43/97 (44.33%), Postives = 71/97 (73.20%), Query Frame = -2 Query: 253 TVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 543 T E+W+++L +++ ++VV +F+A+W GPC+ +APF EL++K +++FL VDVDEL ++ W ++A PTF FLK G+ + K+VGA K ELQ+ + Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20 Identity = 42/97 (43.30%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 253 TVEAWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 543 T E W+++L +++ ++V+ +F+A W GPC+ IAP+ EL++ P+++FL +DVDEL + W ++A PTF FL++G+ VDK+VGA K EL + I Sbjct: 31 TKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.979e-20 Identity = 44/95 (46.32%), Postives = 68/95 (71.58%), Query Frame = -2 Query: 247 WNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAK 531 W + E+ +L+VVDF+ASW GPCR I P + +A K +V F+K+DVDEL VA ++ V AMPTF+ +K GK +++++GAKK+EL++ ++K Sbjct: 36 WQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CN189256 vs. ExPASy Swiss-Prot
Match: THIO_HORSE (Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 4.301e-19 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 253 AWNEQLQKSNETKQLVVVDFTASW*GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 534 A+ E L + E +LVVVDF+A+W GPC+ I PF L++K NV+FL+VDVD+ + VA + V+ MPTF F K+G+ VD+ GA KE+L+ TI Sbjct: 10 AFQEALNSAGE--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKLEATI 101 The following BLAST results are available for this feature:
BLAST of CN189256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189256 ID=CN189256; Name=CN189256; organism=Citrus sinensis; type=EST; length=568bpback to top |