CN189254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 G WK K IKNP YKG W AP IDNPD+ D LY + +LK+VG ELWQVKSG++FDN+LV+DD E A K AE+TWGKH Sbjct: 277 GEWKAKMIKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFDNILVTDDLEAAKKFAEDTWGKH 354
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ DP +Y Y N +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ DP +Y Y N +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ DP +Y Y N +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ DP +Y Y N +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_SCHMA (Calreticulin OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = -3 Query: 467 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 697 G W P++I NP YKG+WK IDNP++K DP+LYV ++ YVG +LWQV SG++FDN+L++D P++A + E W K Sbjct: 271 GEWTPRRIDNPKYKGEWKPVQIDNPEYKHDPELYVLNDIGYVGFDLWQVDSGSIFDNILITDSPDFAKEEGERLWRK 347
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP YKG W P IDNP++ D ++Y Y N +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPEYKGIWIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ D ++Y Y + +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ D ++Y Y + +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = -3 Query: 470 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 697 G WKP++I NP+YKG W P IDNP++ D ++Y Y + +G++LWQVKSGT+FDN L+++D YA + ETWG Sbjct: 273 GEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348 The following BLAST results are available for this feature:
BLAST of CN189254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189254 ID=CN189254; Name=CN189254; organism=Citrus sinensis; type=EST; length=699bpback to top |