DR908624

Overview
NameDR908624
Unique NameDR908624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 40/132 (30.30%), Postives = 61/132 (46.21%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 542
            G++  C+     +V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + +    YIL+   G    C SGF   ++P   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  262 GEAIACAEGCQAIVDTGTSLLSGPTSP--IANIQSYIGASENSNGEMVVSCSAISSLPDIVFTINGIQYPVPASAYILQDEGG----CTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVGLAPVA 387          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 42/131 (32.06%), Postives = 62/131 (47.33%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 539
            G++  C+     +V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 42/131 (32.06%), Postives = 62/131 (47.33%), Query Frame = 3
Query:  147 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 539
            G++  C+     +V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11
Identity = 35/86 (40.70%), Postives = 45/86 (52.33%), Query Frame = 3
Query:  279 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFA 533
            G  +++C  I +MP ++F I      L P  Y+L         C  G     LP P G PLWILGDVF+  Y+TVFD    R+GFA
Sbjct:  306 GNFVVNCNSIQSMPTITFVISGSPLPLPPSTYVLNNNG----YCTLGIEVTYLPSPNGQPLWILGDVFLREYYTVFDMAANRVGFA 387          
BLAST of DR908624 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 3
Query:  279 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 539
            G+  I+C +  ++P+++FT+    F + P  Y L+    +   CIS FM  D P P GPL ILGD F+  +++V+D G   +G A+A
Sbjct:  315 GQYSIECDKRDSLPDLTFTLAGHNFTIGPYDYTLE----VQGSCISSFMGMDFPEPVGPLAILGDAFLRKWYSVYDLGNNAVGLAKA 397          
The following BLAST results are available for this feature:
BLAST of DR908624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PEPA_CALJA4.891e-1130.30Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA4_RABIT4.891e-1132.06Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT4.891e-1132.06Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPB_CANFA6.388e-1140.70Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
CARP_ASPFU8.343e-1136.78Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16752 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-44_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908624 ID=DR908624; Name=DR908624; organism=Citrus sinensis; type=EST; length=605bp
AGTATGGGGATTTAATATGGGATCTCTTAGTATCAGGGCTACTACCTGAG
AAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGCTGAATATGT
GAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTATCAGCCGGGG
ATAGTGCTGTGTGCAGTGCTTGTGAAATGACCGTGGTTTGGGTCCAGAAT
CAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTATATAAATGA
GCTCTGCGACAGCCTGCCAAATCCGATGGGAGAATCAATTATTGACTGTG
GTCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGAGACAAAATT
TTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGAAGGGATTGC
AGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTCCTCCAAGGG
GTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTTTATCACACTGTT
TTCGACTCTGGTAAGCTCCGGATCGGCTTTGCTGAGGCTGCGTAATGATC
TACTTACTGTCAGTTTTTATGTAGTAGCAGCGATCATCACCTGCTCATAT
GAGGA
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