CN189248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 3.685e-36 Identity = 81/152 (53.29%), Postives = 93/152 (61.18%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAV+ G V G+V F QE + GPTT++ ++G G H+H GD TNGC S GPHFNP GK HG DENRH G + TV DN I L GP S+IGR VVVHA DDLGKG E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVVRGDSKVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTDNLIKLIGPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_ASPNG (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger GN=sodC PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HG PED+ RH G A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_ASPNC (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sodC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HG PED+ RH G A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPFGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_YEAST (Superoxide dismutase [Cu-Zn] OS=Saccharomyces cerevisiae GN=SOD1 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.400e-35 Identity = 80/152 (52.63%), Postives = 93/152 (61.18%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MV+AVAVL G GV G V F Q + PTTVS ++G P GFH+H GD TNGC+S GPHFNP K HG P DE RH G A + D+ I L GP S++GR+VV+HA DDLGKG E S TGNAG R ACG+IGL Sbjct: 1 MVQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_HORSE (Superoxide dismutase [Cu-Zn] OS=Equus caballus GN=SOD1 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.829e-35 Identity = 75/150 (50.00%), Postives = 92/150 (61.33%), Query Frame = -2 Query: 156 VKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 602 +KAV VL G V G + F Q+ +G P + G + GL G HGFHVH GD T GC + G HFNP K+HG P+DE RH G A + D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 LKAVCVLKGDGPVHGVIHFEQQQEGGPVVLKGFIEGLTKGDHGFHVHEFGDNTQGCTTAGAHFNPLSKKHGGPKDEERHVGDLGNVTADENGKADVDMKDSVISLSGKHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.829e-35 Identity = 79/152 (51.97%), Postives = 96/152 (63.16%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVA + G + GTV+F Q E + PTT++ +++G G HVH GD TNGC S GPHFNP G+ HG P DE RH G AT +V D+ I L GP S+IGR VVVH+ DDLGKG +E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVATVRGDSKISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSHIKLIGPLSVIGRTVVVHSGTDDLGKGENEESKKTGNAGTRPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_EMENI (Superoxide dismutase [Cu-Zn] OS=Emericella nidulans GN=sodA PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.119e-35 Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAVL G V GTV+F Q + TTVS +++G P GFH+H GD TNGC S GPHFNP GK HG PEDE RH G + + D I L G S++GR +VVHA DDLG+G E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKVSGTVTFEQADENSNTTVSWNITGNDPNAERGFHIHQFGDNTNGCTSAGPHFNPFGKTHGAPEDEVRHVGDLGNFKTDAEGNSKGSKTDKLIKLIGAESVLGRTLVVHAGTDDLGRGDSEESKKTGNAGARPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_HUMLT (Superoxide dismutase [Cu-Zn] OS=Humicola lutea PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.074e-35 Identity = 78/152 (51.32%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAVL G + GTV+F Q + PTTVS +++G P G H+H GD TNGC S GPH+NP K HG P DE RH G A +V D I + G SI+GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKITGTVTFEQANESAPTTVSWNITGHDPNAERGMHIHQFGDNTNGCTSAGPHYNPFKKTHGAPTDEVRHVGDLGNIKTDAEGNAVGSVQDKLIKVIGAESILGRTIVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_HAECO (Superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.949e-35 Identity = 75/150 (50.00%), Postives = 94/150 (62.67%), Query Frame = -2 Query: 162 KAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGII 599 +AVAVL G GV GTV FSQ+ + P + G + GL PG HGFHVH GD+TNGC S GPHFNP K HG P+D+ RH G A F + D+ + + G ++++GR++VVHA DDLGKG E S TGN G RVACG+I Sbjct: 4 RAVAVLRGDPGVTGTVWFSQDKESDPCVIKGEIKGLTPGLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEIKDHLVKIHGEHTVVGRSLVVHAGTDDLGKGVGEKKEESLKTGNRGARVACGVI 153
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_ASPFL (Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus GN=sodC PE=3 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 6.949e-35 Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAVAV G ++ + GTV+F Q + + PTTVS +++G FHVH GD TNGC S GPHFNP GKEHG PEDENRH G A + D I L G S++GR +V+HA DDLG+ H SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVRGDSK-ISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 151 The following BLAST results are available for this feature:
BLAST of CN189248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189248 ID=CN189248; Name=CN189248; organism=Citrus sinensis; type=EST; length=636bpback to top |