CN189248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.641e-34 Identity = 77/152 (50.66%), Postives = 92/152 (60.53%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKP-GPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAV VL G + G V+F QE D PTT+S +S GFH+ GD TNGC S GPHFNP GK HG DENRH G + ++ D I L GP+S+IGR VV+HA DDLGKGG++ S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKGGNDESLKTGNAGPRPACGVIGV 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.641e-34 Identity = 74/152 (48.68%), Postives = 90/152 (59.21%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MVKAV V+ G V G++ F QE + PT ++ +SG G H+H GD TNGC S GPHFNP K HG PED NRH G + TV D+ + L GP S+IGR +VVH DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVVRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.449e-34 Identity = 78/152 (51.32%), Postives = 88/152 (57.89%), Query Frame = -2 Query: 156 MVKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 605 MV AVAVL G V G V F QE D T +S ++G GFH+H GD TNGC S GPHFNP K HG PEDE RH G + ++ D I L GP SI+GR VVVHA DDLGKGG S TGNAG R ACG+IG+ Sbjct: 1 MVNAVAVLKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIGI 152
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.504e-34 Identity = 80/166 (48.19%), Postives = 98/166 (59.04%), Query Frame = -2 Query: 156 KKSHSTMV------KAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGG---HELSKTTGNAGGRVACGIIGL 623 ++SHS + +AVAVL G GV G + F Q G TT+SGS+SGL PG HGFHVH GD TNGC S G H+NP GK HG P D +H G A + I L GP S+IG ++VVHA+ DDLG+G E S TGNAG R+ACG+IG+ Sbjct: 32 RRSHSNGMHGNGARRAVAVLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLACGVIGI 197
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.683e-34 Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 156 KAVAVLGGTEGVKGTVSFSQEGDGPTTV-SGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 599 +AVAVL G E V GT+ +Q+ + V G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P+ E RH G A + D + L GPN+++GR++VVHA DDLG+G E SK TGNAG R ACG+I L Sbjct: 26 RAVAVLRG-ETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 176
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.311e-33 Identity = 79/150 (52.67%), Postives = 94/150 (62.67%), Query Frame = -2 Query: 162 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRH-AXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 605 MVKA+ V+ G V GT+ FSQE +G P V+G++SGL G HGFH+H GDT+NGC+S G HFNP EHG P RH A + DN I L G SIIGR +VVH + DDLG GG+ LSKTTGNAG RVACGI+ Sbjct: 1 MVKAICVVKGAV-VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLGGN-LSKTTGNAGARVACGIL 148
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODE_HAECO (Extracellular superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.712e-33 Identity = 72/146 (49.32%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 156 AVLGGTEG-VKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 590 AV GG G + Q G ++GS+SGL+PG HGFH+H GD NGC++ G HFNP HG PED NRH G + D+ I L+G +++IGRA+V+HAD DDLG+G ELSKTTGNAG RVACG+IG+ Sbjct: 38 AVKGGNPAKTVGIIDLVQTGT-LVKMNGSVSGLQPGLHGFHIHEKGDLGNGCLAAGAHFNPHKMMHGAPEDSNRHVGDLGNIETPKTGDTPILISDSVISLTGQHNVIGRAIVIHADMDDLGRGTSELSKTTGNAGARVACGVIGI 182
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.920e-33 Identity = 75/152 (49.34%), Postives = 91/152 (59.87%), Query Frame = -2 Query: 156 KAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 599 +AVAVL G + V GT+ +Q + P + G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P E RH G A + D I L G N++IGR++VVHA DDLG+G E S TGNAG R ACG+I L Sbjct: 26 RAVAVLRG-DVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAACGVIAL 176
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC_NPVAC (Putative superoxide dismutase [Cu-Zn] OS=Autographa californica nuclear polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.472e-32 Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = -2 Query: 156 VKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 602 +KA+ ++ G V G + F QE + P +SG L L G HGFHVH GDT+NGC S G HFNP ++HG P+ E RH + T ++DN + L GP++IIGR++VVH D DDLG H LSKTTGN+GGR+ CGII + Sbjct: 1 MKAICIISGD--VHGKIYFQQESANQPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSAGYNSLTEVNMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTDHPLSKTTGNSGGRLGCGIIAI 149
BLAST of CN189248 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32 Identity = 69/149 (46.31%), Postives = 94/149 (63.09%), Query Frame = -2 Query: 162 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 605 MV A+ ++ G GV+G V+ SQE +G P ++G++SGL PG HG HVH GDT+NGC+S G H+NP +EHG P D RH G AT ++ D + L G S++GR +V+H+D DD G+G SKT G++G RV CGII Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHSDRDDYGRGNFPDSKTAGHSGKRVGCGII 148 The following BLAST results are available for this feature:
BLAST of CN189248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189248 ID=CN189248; Name=CN189248; organism=Citrus sinensis; type=EST; length=636bpback to top |